RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 TADA2BQ86TJ2 420 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 CREBRFQ8IUR6 639 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 ATRIPQ8WXE1 791 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 OTUB2Q96DC9 234 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 CHFRQ96EP1 664 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 ZSCAN32Q9NX65 697 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 DACH1Q9UI36 760 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 SH3BP1Q9Y3L3 701 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 PCDHB4Q9Y5E5 795 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 PCDHGA2Q9Y5H1 932 aa24.23■■□□□ 1.47
PTPN4-208ENST00000460289 ZFHX2Q9C0A1 2572 aaPredicted RBP24.22■■□□□ 1.47
PTPN4-208ENST00000460289 PRR23AA6NEV1 266 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 PAEPP09466 180 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 PGFP49763 221 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 GAS6Q14393 721 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 TPD52L1Q16890 204 aaPredicted RBP24.22■■□□□ 1.47
PTPN4-208ENST00000460289 FSTL4Q6MZW2 842 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 KLHDC10Q6PID8 442 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 PIGZQ86VD9 579 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 ZNF276Q8N554 614 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 NELL1Q92832 810 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 CD101Q93033 1021 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 ZFRQ96KR1 1074 aaKnown RBP24.22■■□□□ 1.47
PTPN4-208ENST00000460289 TSPAN16Q9UKR8 245 aa24.22■■□□□ 1.47
PTPN4-208ENST00000460289 HELZP42694 1942 aaKnown RBP24.22■■□□□ 1.47
PTPN4-208ENST00000460289 PATJQ8NI35 1801 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 A0A1W2PQH9 124 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 ATG13O75143 517 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 BCAT1P54687 386 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 GOLGA8FQ08AF8 430 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 GOLGA8DPQ0D2H9 430 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 GOLGA7BQ2TAP0 167 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 FBXO43Q4G163 708 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 TSSK4Q6SA08 328 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 RRAGAQ7L523 313 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 ASCL5Q7RTU5 278 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 ARHGAP18Q8N392 663 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 CNOT6LQ96LI5 555 aaKnown RBP24.21■■□□□ 1.47
PTPN4-208ENST00000460289 MED15Q96RN5 788 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 CDK5RAP1Q96SZ6 601 aaKnown RBP24.21■■□□□ 1.47
PTPN4-208ENST00000460289 CLIC5Q9NZA1 410 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 NAGPAQ9UK23 515 aa24.21■■□□□ 1.47
PTPN4-208ENST00000460289 GOLGA6L22H0YM25 854 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 XPO1O14980 1071 aaKnown RBP24.2■■□□□ 1.46
PTPN4-208ENST00000460289 RALAP11233 206 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 RARGP13631 454 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 DHCR24Q15392 516 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 RAB41Q5JT25 222 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 Q6ZS52 159 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 TTC30AQ86WT1 665 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 ZBTB44Q8NCP5 570 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 CCDC26Q8TAB7 109 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 INTS2Q9H0H0 1204 aaKnown RBP24.2■■□□□ 1.46
PTPN4-208ENST00000460289 NMUR1Q9HB89 426 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 FBRSL1Q9HCM7 1045 aaKnown RBP24.2■■□□□ 1.46
PTPN4-208ENST00000460289 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.2■■□□□ 1.46
PTPN4-208ENST00000460289 OSER1Q9NX31 292 aa24.2■■□□□ 1.46
PTPN4-208ENST00000460289 PAPSS2O95340 614 aaPredicted RBP24.19■■□□□ 1.46
PTPN4-208ENST00000460289 TBX18O95935 607 aa24.19■■□□□ 1.46
PTPN4-208ENST00000460289 ADH1CP00326 375 aa24.19■■□□□ 1.46
PTPN4-208ENST00000460289 LMNAP02545 664 aaKnown RBP24.19■■□□□ 1.46
PTPN4-208ENST00000460289 CYP17A1P05093 508 aa24.19■■□□□ 1.46
PTPN4-208ENST00000460289 ERCC5P28715 1186 aaPredicted RBP24.19■■□□□ 1.46
PTPN4-208ENST00000460289 SATB1Q01826 763 aa24.19■■□□□ 1.46
PTPN4-208ENST00000460289 PDE4CQ08493 712 aa24.19■■□□□ 1.46
PTPN4-208ENST00000460289 BST2Q10589 180 aaKnown RBP24.19■■□□□ 1.46
PTPN4-208ENST00000460289 STILQ15468 1287 aa24.19■■□□□ 1.46
PTPN4-208ENST00000460289 IPO9Q96P70 1041 aaKnown RBP24.19■■□□□ 1.46
PTPN4-208ENST00000460289 KLF16Q9BXK1 252 aaPredicted RBP24.19■■□□□ 1.46
PTPN4-208ENST00000460289 DNMT3LQ9UJW3 386 aa24.19■■□□□ 1.46
PTPN4-208ENST00000460289 O00370 1275 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 EGFP01133 1207 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 SETSIPP0DME0 302 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 TDGF1P13385 188 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 PLA2G4AP47712 749 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 TKTL1P51854 596 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 CT47A1Q5JQC4 288 aaPredicted RBP24.18■■□□□ 1.46
PTPN4-208ENST00000460289 C10orf120Q5SQS8 335 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 RHBDF2Q6PJF5 856 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 LCLAT1Q6UWP7 414 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 HTR3DQ70Z44 454 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 SCD5Q86SK9 330 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 ARHGEF19Q8IW93 802 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 FAM114A1Q8IWE2 563 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 KAT5Q92993 513 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 FAM81BQ96LP2 452 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 THAP9Q9H5L6 903 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 LRRC4Q9HBW1 653 aa24.18■■□□□ 1.46
PTPN4-208ENST00000460289 SCAMP3O14828 347 aaKnown RBP24.17■■□□□ 1.46
PTPN4-208ENST00000460289 ZBED1O96006 694 aa24.17■■□□□ 1.46
PTPN4-208ENST00000460289 IRF1P10914 325 aa24.17■■□□□ 1.46
PTPN4-208ENST00000460289 MTIF2P46199 727 aaKnown RBP24.17■■□□□ 1.46
PTPN4-208ENST00000460289 CNGA2Q16280 664 aa24.17■■□□□ 1.46
PTPN4-208ENST00000460289 DPCR1Q3MIW9 517 aa24.17■■□□□ 1.46
PTPN4-208ENST00000460289 PM20D1Q6GTS8 502 aa24.17■■□□□ 1.46
PTPN4-208ENST00000460289 IRF2BP1Q8IU81 584 aa24.17■■□□□ 1.46
PTPN4-208ENST00000460289 RBBP8NLQ8NC74 664 aaPredicted RBP24.17■■□□□ 1.46
PTPN4-208ENST00000460289 UBA3Q8TBC4 463 aa24.17■■□□□ 1.46
PTPN4-208ENST00000460289 LSM7Q9UK45 103 aaKnown RBP24.17■■□□□ 1.46
PTPN4-208ENST00000460289 MYO15AQ9UKN7 3530 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms