RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PTPN4P29074 926 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 ATXN3P54252 364 aaPredicted RBP15.26■□□□□ 0.03
PTPRU-205ENST00000460170 SNX17Q15036 470 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 DCLRE1BQ9H816 532 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 TRPC5OSA6NMA1 111 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 LACTBL1A8MY62 500 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 CXCL11O14625 94 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 GRK2P25098 689 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 MAMLD1Q13495 774 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 RASA2Q15283 850 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 HGSNATQ68CP4 663 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 DUPD1Q68J44 220 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 COLGALT1Q8NBJ5 622 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 SNTG2Q9NY99 539 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 DNAJC16Q9Y2G8 782 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.26■□□□□ 0.03
PTPRU-205ENST00000460170 APOC4-APOC2K7ER74 178 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 AKAP10O43572 662 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 TBC1D12O60347 775 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 CALCAP01258 141 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 APOC2P02655 101 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 ZNF286BP0CG31 522 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 GLRA2P23416 452 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 RRP1BQ14684 758 aaKnown RBP15.26■□□□□ 0.03
PTPRU-205ENST00000460170 IFNEQ86WN2 208 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 ABI2Q9NYB9 513 aaPredicted RBP15.26■□□□□ 0.03
PTPRU-205ENST00000460170 HMGCRP04035 888 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 RALBP11234 206 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 ACADSP16219 412 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 ETFBP38117 255 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 NPY5RQ15761 445 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 C6orf10Q5SRN2 563 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 ZDHHC17Q8IUH5 632 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 CENPTQ96BT3 561 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 LRRC19Q9H756 370 aa15.26■□□□□ 0.03
PTPRU-205ENST00000460170 TMEM247A6NEH6 219 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 SRRM3A6NNA2 597 aaPredicted RBP15.25■□□□□ 0.03
PTPRU-205ENST00000460170 KBTBD13C9JR72 458 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 TMCC1O94876 653 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 SHBGP04278 402 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 HUNKP57058 714 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 MGAT5Q09328 741 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 FOXD4Q12950 439 aaPredicted RBP15.25■□□□□ 0.03
PTPRU-205ENST00000460170 STRA8Q7Z7C7 330 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 APOL2Q9BQE5 337 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 CCDC90BQ9GZT6 254 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 CCDC134Q9H6E4 229 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 PRG3Q9Y2Y8 225 aaPredicted RBP15.25■□□□□ 0.03
PTPRU-205ENST00000460170 JCHAINP01591 159 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 UBA1P22314 1058 aaKnown RBP15.25■□□□□ 0.03
PTPRU-205ENST00000460170 NUDT2P50583 147 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 DENND1BQ6P3S1 775 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 ELMSAN1Q6PJG2 1045 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 SLITRK1Q96PX8 696 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 SETD4Q9NVD3 440 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 CYP39A1Q9NYL5 469 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 ATP9AO75110 1047 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 MYO1DO94832 1006 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 C10orf120Q5SQS8 335 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 AGAP9Q5VTM2 703 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 NUP93Q8N1F7 819 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 SLC13A4Q9UKG4 626 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 SUPT3HB4E1H0 165 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 SUPT3HO75486 399 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 MAP3K7CLP57077 242 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 FLOT2Q14254 428 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 LRRC38Q5VT99 294 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 SCUBE1Q8IWY4 988 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 MTFR1LQ9H019 292 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 DLGAP2Q9P1A6 1054 aa15.25■□□□□ 0.03
PTPRU-205ENST00000460170 H2AFYO75367 372 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 ATP6V1G2O95670 118 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 ZSCAN5DPP0CG00 497 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 OCA2Q04671 838 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 STX5Q13190 355 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 AUHQ13825 339 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 GRIK4Q16099 956 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 RAET1EQ8TD07 263 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 IARS2Q9NSE4 1012 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 THRAP10827 490 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 CPA3P15088 417 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 LHX1P48742 406 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 TKTL1P51854 596 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 ZACNQ401N2 412 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 NT5DC4Q86YG4 428 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 ATP6V0D2Q8N8Y2 350 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 GPR182O15218 404 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 NCAM2O15394 837 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 LCA5LO95447 670 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 ESRRBO95718 433 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 THP07101 528 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 MPP3Q13368 585 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 TTC23LQ6PF05 361 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 UNC45BQ8IWX7 931 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 C12orf56Q8IXR9 622 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 MUC3BQ9H195 1237 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 LATS2Q9NRM7 1088 aa15.24■□□□□ 0.03
PTPRU-205ENST00000460170 STX18Q9P2W9 335 aaKnown RBP15.24■□□□□ 0.03
PTPRU-205ENST00000460170 FARP1Q9Y4F1 1045 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms