RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 A0A0U1RQF3 1178 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 GRXCR1A8MXD5 290 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 RASA4BC9J798 803 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 K7ENM7 598 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 NVLO15381 856 aaKnown RBP16.47■□□□□ 0.23
CMTM3-203ENST00000460097 RASA4O43374 803 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 STAG3L1P0CL83 205 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 SP100P23497 879 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-203ENST00000460097 ABCD1P33897 745 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 RPS6KA3P51812 740 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 CCNG2Q16589 344 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 GSTA3Q16772 222 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 CCDC142Q17RM4 750 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 TMEM132AQ24JP5 1023 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 FAM109BQ6ICB4 259 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-203ENST00000460097 OR52E8Q6IFG1 317 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 TMCO2Q7Z6W1 182 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-203ENST00000460097 KCNV2Q8TDN2 545 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 PCDHB18PQ96TA0 734 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 PHACTR1Q9C0D0 580 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 UBE2TQ9NPD8 197 aaPredicted RBP16.47■□□□□ 0.23
CMTM3-203ENST00000460097 PCDHB7Q9Y5E2 793 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 TRIOBPQ9H2D6 2365 aa16.47■□□□□ 0.23
CMTM3-203ENST00000460097 PDLIM1O00151 329 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 GJB5O95377 273 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 NMT1P30419 496 aaKnown RBP16.46■□□□□ 0.23
CMTM3-203ENST00000460097 KCTD19Q17RG1 926 aaPredicted RBP16.46■□□□□ 0.23
CMTM3-203ENST00000460097 THEMIS2Q5TEJ8 643 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 FAM91A1Q658Y4 838 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 FAM117BQ6P1L5 589 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 C4orf50Q6ZRC1 276 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 TAS1R3Q7RTX0 852 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 NPAS4Q8IUM7 802 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 RNF217Q8TC41 542 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 KCNN1Q92952 543 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 DTNBP1Q96EV8 351 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 SYT15Q9BQS2 421 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 DENND2DQ9H6A0 471 aaPredicted RBP16.46■□□□□ 0.23
CMTM3-203ENST00000460097 TMEM206Q9H813 350 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 SLC24A2Q9UI40 661 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 SCOCQ9UIL1 159 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 HAO1Q9UJM8 370 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 LRFN2Q9ULH4 789 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 CNTNAP2Q9UHC6 1331 aa16.46■□□□□ 0.23
CMTM3-203ENST00000460097 TMEM110-MUSTN1A8MSY1 372 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 CLDN3O15551 220 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 CCDC22O60826 627 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 TRIM49P0CI25 452 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 TRIM49CP0CI26 452 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 TARSP26639 723 aaKnown RBP16.46■□□□□ 0.22
CMTM3-203ENST00000460097 CDC25CP30307 473 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 SMAD3P84022 425 aaKnown RBP16.46■□□□□ 0.22
CMTM3-203ENST00000460097 DYNC1I2Q13409 638 aaKnown RBP16.46■□□□□ 0.22
CMTM3-203ENST00000460097 HABP4Q5JVS0 413 aaKnown RBP16.46■□□□□ 0.22
CMTM3-203ENST00000460097 TRIM68Q6AZZ1 485 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 TMEM154Q6P9G4 183 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 NOP9Q86U38 636 aaKnown RBP16.46■□□□□ 0.22
CMTM3-203ENST00000460097 ARHGAP18Q8N392 663 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 LRRC8CQ8TDW0 803 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 SHC3Q92529 594 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 MRPL4Q9BYD3 311 aaKnown RBP16.46■□□□□ 0.22
CMTM3-203ENST00000460097 ST6GALNAC4Q9H4F1 302 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 ELAC1Q9H777 363 aaKnown RBP16.46■□□□□ 0.22
CMTM3-203ENST00000460097 FAM105AQ9NUU6 356 aa16.46■□□□□ 0.22
CMTM3-203ENST00000460097 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.46■□□□□ 0.22
CMTM3-203ENST00000460097 TTC3P53804 2025 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 TTLL13PA6NNM8 815 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 TLL1O43897 1013 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 DNAJC6O75061 913 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 LRRN2O75325 713 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 EOMESO95936 686 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 MYBL1P10243 752 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 RABGGTBP53611 331 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 GTF2BQ00403 316 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 FMO1Q01740 532 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 CDR2Q01850 454 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 ENPEPQ07075 957 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 KLF1Q13351 362 aaPredicted RBP16.45■□□□□ 0.22
CMTM3-203ENST00000460097 MUM1Q2TAK8 710 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 UBXN11Q5T124 520 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 SLC27A1Q6PCB7 646 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 CRIPAKQ8N1N5 446 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 TRIM11Q96F44 468 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 RAD9AQ99638 391 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 MLXIPLQ9NP71 852 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 TMEM161AQ9NX61 479 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 PDP2Q9P2J9 529 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 TBX20Q9UMR3 447 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 INSL6Q9Y581 213 aa16.45■□□□□ 0.22
CMTM3-203ENST00000460097 ZNF623O75123 536 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 EDN1P05305 212 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 DLATP10515 647 aaKnown RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 ADCY8P40145 1251 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 SH3BGRP55822 239 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 CTC1Q2NKJ3 1217 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 ZC2HC1CQ53FD0 456 aaPredicted RBP16.44■□□□□ 0.22
CMTM3-203ENST00000460097 ATF7IP2Q5U623 682 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 FYB2Q5VWT5 728 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 ACAD10Q6JQN1 1059 aa16.44■□□□□ 0.22
CMTM3-203ENST00000460097 SDCCAG8Q86SQ7 713 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms