RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 MMGT1Q8N4V1 131 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 GJD4Q96KN9 370 aaPredicted RBP20.27■□□□□ 0.83
SNX27-204ENST00000458013 SERPINB12Q96P63 405 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 SLITRK1Q96PX8 696 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 SEMA6BQ9H3T3 888 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 HECW2Q9P2P5 1572 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 WDR27A2RRH5 827 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 CFAP99D6REC4 459 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 GEMP55040 296 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 POU6F1Q14863 301 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 ZCWPW2Q504Y3 356 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 PLEKHA7Q6IQ23 1121 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 UGT3A1Q6NUS8 523 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 VPS37AQ8NEZ2 397 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 TSEN34Q9BSV6 310 aaKnown RBP20.27■□□□□ 0.83
SNX27-204ENST00000458013 SEMA6AQ9H2E6 1030 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 ZMYM5Q9UJ78 669 aa20.27■□□□□ 0.83
SNX27-204ENST00000458013 FXR2P51116 673 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNX27-204ENST00000458013 MMRN1Q13201 1228 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 MAPK11Q15759 364 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 TYW3Q6IPR3 259 aaKnown RBP20.26■□□□□ 0.83
SNX27-204ENST00000458013 RNF148Q8N7C7 305 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 ADAM32Q8TC27 787 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 DDI1Q8WTU0 396 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 PRCCQ92733 491 aaPredicted RBP20.26■□□□□ 0.83
SNX27-204ENST00000458013 TMBIM4Q9HC24 238 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 USP18Q9UMW8 372 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 B3GAT3O94766 335 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 GJB6O95452 261 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 CYP11B1P15538 503 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 RPA1P27694 616 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 ATP12AP54707 1039 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 LINC00523Q86TU6 105 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 PPP1R10Q96QC0 940 aaKnown RBP20.26■□□□□ 0.83
SNX27-204ENST00000458013 HDHD2Q9H0R4 259 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 CDC42EP4Q9H3Q1 356 aaKnown RBP20.26■□□□□ 0.83
SNX27-204ENST00000458013 NYAP2Q9P242 653 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 TUBE1Q9UJT0 475 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 KDM6AO15550 1401 aaPredicted RBP20.26■□□□□ 0.83
SNX27-204ENST00000458013 CAMTA2O94983 1202 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 RRM2P31350 389 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 FDFT1P37268 417 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 BNC2Q6ZN30 1099 aaPredicted RBP20.26■□□□□ 0.83
SNX27-204ENST00000458013 EXD1Q8NHP7 514 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 MARK4Q96L34 752 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 TRPC4Q9UBN4 977 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 PSTPIP1O43586 416 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 GLRA3O75311 464 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 STAG3L1P0CL83 205 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 IL5RAQ01344 420 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 ATP6AP1LQ52LC2 224 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 ATP8B4Q8TF62 1192 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 LPAR1Q92633 364 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 STMN3Q9NZ72 180 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 FZD1Q9UP38 647 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 HBP1O60381 514 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 ANXA9O76027 345 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 NFICP08651 508 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 SLC2A4P14672 509 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 CDC25CP30307 473 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 POLD3Q15054 466 aaPredicted RBP20.26■□□□□ 0.83
SNX27-204ENST00000458013 RASA2Q15283 850 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 TFDP3Q5H9I0 405 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 IZUMO2Q6UXV1 221 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 PRMT7Q9NVM4 692 aaPredicted RBP20.26■□□□□ 0.83
SNX27-204ENST00000458013 SEPT3Q9UH03 358 aa20.26■□□□□ 0.83
SNX27-204ENST00000458013 TRIM43BA6NCK2 446 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 MAGEB2O15479 319 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 POMCP01189 267 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 MAPK7Q13164 816 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 SLC12A8A0AV02 714 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 AKAP5P24588 427 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 SLC11A2P49281 568 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 COL23A1Q86Y22 540 aaPredicted RBP20.25■□□□□ 0.83
SNX27-204ENST00000458013 TMC2Q8TDI7 906 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 UTP15Q8TED0 518 aaKnown RBP20.25■□□□□ 0.83
SNX27-204ENST00000458013 SH3GL1Q99961 368 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 SENP6Q9GZR1 1112 aaPredicted RBP20.25■□□□□ 0.83
SNX27-204ENST00000458013 DEFB129Q9H1M3 183 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 TRPM1Q7Z4N2 1603 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 FAM20BO75063 409 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 ACAT1P24752 427 aaKnown RBP20.25■□□□□ 0.83
SNX27-204ENST00000458013 LAMB3Q13751 1172 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 TSGA10IPQ3SY00 556 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 PGLYRP2Q96PD5 576 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 TMEM79Q9BSE2 394 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 TMEM150BA6NC51 233 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 C19orf81C9J6K1 198 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 SOX6P35712 828 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 OXCT1P55809 520 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 SBK1Q52WX2 424 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 SH3BP5LQ7L8J4 393 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 MYO1HQ8N1T3 1032 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 RDM1Q8NG50 284 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 POLG2Q9UHN1 485 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 TNS3Q68CZ2 1445 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 AK9Q5TCS8 1911 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 CDC42BPBQ9Y5S2 1711 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 MAGEA13PA6NCF6 341 aa20.25■□□□□ 0.83
SNX27-204ENST00000458013 VAC14Q08AM6 782 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms