RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 UBA3Q8TBC4 463 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 ACTL9Q8TC94 416 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 WDR60Q8WVS4 1066 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 CPXM1Q96SM3 734 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 PAFAH2Q99487 392 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 LPIN3Q9BQK8 851 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 NFKBIZQ9BYH8 718 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 PARVAQ9NVD7 372 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 SNTG2Q9NY99 539 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 GJD2Q9UKL4 321 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 CHMP2BQ9UQN3 213 aa12.96□□□□□ -0.34
LINC00959-201ENST00000456581 KRT36O76013 467 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 MCF2P10911 925 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 RFC1P35251 1148 aaPredicted RBP12.95□□□□□ -0.34
LINC00959-201ENST00000456581 CDKN2BP42772 138 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 VCPP55072 806 aaKnown RBP12.95□□□□□ -0.34
LINC00959-201ENST00000456581 SURF1Q15526 300 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 SMAD1Q15797 465 aaKnown RBP12.95□□□□□ -0.34
LINC00959-201ENST00000456581 HIF1AQ16665 826 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 FAM187BQ17R55 369 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 RNF220Q5VTB9 566 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 DNAJC24Q6P3W2 148 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 NPNTQ6UXI9 565 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 UNC45BQ8IWX7 931 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 FAM71DQ8N9W8 422 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 CPT1BQ92523 772 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 HPDLQ96IR7 371 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 TCRBV5S1A1TA0A578 114 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 E5RJQ4 531 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 PRPF4O43172 522 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00959-201ENST00000456581 TJP3O95049 919 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 SMIM10L2AP0DMW4 78 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 SMIM10L2BP0DMW5 78 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 CALB2P22676 271 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 ZNF157P51786 506 aaPredicted RBP12.95□□□□□ -0.34
LINC00959-201ENST00000456581 TMEM132DQ14C87 1099 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 ZNF276Q8N554 614 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 TMEM35BQ8NCS4 154 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 DNAJB3Q8WWF6 145 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 C18orf25Q96B23 403 aaPredicted RBP12.95□□□□□ -0.34
LINC00959-201ENST00000456581 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
LINC00959-201ENST00000456581 DDX50Q9BQ39 737 aaKnown RBP12.95□□□□□ -0.34
LINC00959-201ENST00000456581 CADM1Q9BY67 442 aaKnown RBP12.95□□□□□ -0.34
LINC00959-201ENST00000456581 CST8O60676 142 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 AKAP5P24588 427 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 CTC1Q2NKJ3 1217 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 CLNKQ7Z7G1 428 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 BBOF1Q8ND07 529 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 PYROXD1Q8WU10 500 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 ACAP3Q96P50 834 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 MECRQ9BV79 373 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 BCO2Q9BYV7 579 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 KLK14Q9P0G3 267 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 PSMC3IPQ9P2W1 217 aaPredicted RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 ACTL7BQ9Y614 415 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 LAMA2P24043 3122 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 A6NHS1 94 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 ALOX15BO15296 676 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 TREHO43280 583 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 IL18RAPO95256 599 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 ABHD2P08910 425 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 SERPINB3P29508 390 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 PCK1P35558 622 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 BASP1P80723 227 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 CCDC15Q0P6D6 951 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 TFDP3Q5H9I0 405 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 SH3PXD2AQ5TCZ1 1133 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 CENPUQ71F23 418 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 TLK2Q86UE8 772 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 RCOR2Q8IZ40 523 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 STK32AQ8WU08 396 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 TTC17Q96AE7 1141 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 PIWIL1Q96J94 861 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 VCPIP1Q96JH7 1222 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 SERAC1Q96JX3 654 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 RAB3IPQ96QF0 476 aaPredicted RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 ADAMTS10Q9H324 1103 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 NXF3Q9H4D5 531 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 DPP3Q9NY33 737 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 HEY2Q9UBP5 337 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 IP6K2Q9UHH9 426 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 SCINQ9Y6U3 715 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 CYP3A5P20815 502 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 BGNP21810 368 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 RPL22P35268 128 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 GEMIN4P57678 1058 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 MMRN1Q13201 1228 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 FAXCQ5TGI0 409 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 CES4AQ5XG92 561 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 IQSEC1Q6DN90 963 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 CATSPER4Q7RTX7 472 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 ZC3H18Q86VM9 953 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 HEXIM2Q96MH2 286 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 FAM111AQ96PZ2 611 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms