RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 XPO1O14980 1071 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 LAMTOR5O43504 91 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 NFATC1O95644 943 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 OLFM2O95897 454 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 SETSIPP0DME0 302 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 IRF1P10914 325 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 RARGP13631 454 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 BRD2P25440 801 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 PLA2G5P39877 138 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 TKTL1P51854 596 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 NHLH1Q02575 133 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 CNGA2Q16280 664 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 C10orf120Q5SQS8 335 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 CCDC186Q7Z3E2 898 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 TTC30AQ86WT1 665 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 RIN3Q8TB24 985 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 KREMEN1Q96MU8 473 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 DLGAP2Q9P1A6 1054 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 TBC1D14Q9P2M4 693 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 APEX2Q9UBZ4 518 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 COL4A3Q01955 1670 aa19.03■□□□□ 0.64
PDLIM2-215ENST00000456545 M0QYV0 167 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 O00370 1275 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 MED7O43513 233 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 EEF1GP26641 437 aaKnown RBP19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 PON1P27169 355 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 RPS9P46781 194 aaKnown RBP19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 GRSF1Q12849 480 aaKnown RBP eCLIP19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 EML3Q32P44 896 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 TCP11X2Q5H9J9 407 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 DGKKQ5KSL6 1271 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 LCLAT1Q6UWP7 414 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 SIX6OS1Q8N1H7 587 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 ANKRD20A12PQ8NF67 263 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 TFAP2BQ92481 460 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 CLDN23Q96B33 292 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 CDK5RAP1Q96SZ6 601 aaKnown RBP19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 NMUR1Q9HB89 426 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 USP3Q9Y6I4 520 aa19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 KIF26AQ9ULI4 1882 aaPredicted RBP19.02■□□□□ 0.64
PDLIM2-215ENST00000456545 MYO16Q9Y6X6 1858 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 E2F8A0AVK6 867 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 SCAMP3O14828 347 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 TBX18O95935 607 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 ZBED1O96006 694 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 ZXDBP98169 803 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 GJB7Q6PEY0 223 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 TXNDC11Q6PKC3 985 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 RSRC2Q7L4I2 434 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 KIAA1958Q8N8K9 716 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 FAM86C1Q9NVL1 165 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 DNMT3LQ9UJW3 386 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 LSM7Q9UK45 103 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 NUDT5Q9UKK9 219 aa19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 HELZP42694 1942 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-215ENST00000456545 PATJQ8NI35 1801 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 SHISA7A6NL88 538 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 TULP2O00295 520 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 THAP12O43422 761 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 LETM1O95202 739 aaPredicted RBP19■□□□□ 0.63
PDLIM2-215ENST00000456545 CALCAP01258 141 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 CHRNB1P11230 501 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 LCP1P13796 627 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 CDK11BP21127 795 aaKnown RBP19■□□□□ 0.63
PDLIM2-215ENST00000456545 GJA4P35212 333 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 PLA2G4AP47712 749 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 PGFP49763 221 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 YWHAGP61981 247 aaKnown RBP eCLIP19■□□□□ 0.63
PDLIM2-215ENST00000456545 RAB41Q5JT25 222 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 BTBD8Q5XKL5 378 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 SECISBP2LQ93073 1101 aaKnown RBP19■□□□□ 0.63
PDLIM2-215ENST00000456545 ULBP1Q9BZM6 244 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 NAT10Q9H0A0 1025 aaKnown RBP19■□□□□ 0.63
PDLIM2-215ENST00000456545 VPS16Q9H269 839 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 CYLDQ9NQC7 956 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19■□□□□ 0.63
PDLIM2-215ENST00000456545 OSER1Q9NX31 292 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 TAB2Q9NYJ8 693 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 CLIC5Q9NZA1 410 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 DNAJC12Q9UKB3 198 aa19■□□□□ 0.63
PDLIM2-215ENST00000456545 WDR3Q9UNX4 943 aaKnown RBP eCLIP19■□□□□ 0.63
PDLIM2-215ENST00000456545 OTOL1A6NHN0 477 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 RGS7P49802 495 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 GALK1P51570 392 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 ADIGQ0VDE8 80 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 FZD5Q13467 585 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 PPP2R5DQ14738 602 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 CAVIN1Q6NZI2 390 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 SCD5Q86SK9 330 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 MIB1Q86YT6 1006 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 ADGRG2Q8IZP9 1017 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 RNF139Q8WU17 664 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 KCTD13Q8WZ19 329 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 P2RY13Q9BPV8 354 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 IER2Q9BTL4 223 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 RBM12Q9NTZ6 932 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 FANCLQ9NW38 375 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 TMEM63CQ9P1W3 806 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 RASAL2Q9UJF2 1139 aa18.99■□□□□ 0.63
PDLIM2-215ENST00000456545 CNTN6Q9UQ52 1028 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms