RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 LRRC38Q5VT99 294 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 TATDN1Q6P1N9 297 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 DNAJC24Q6P3W2 148 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 KLC3Q6P597 504 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 IYDQ6PHW0 289 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 ATG14Q6ZNE5 492 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 MIPOL1Q8TD10 442 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 GAB3Q8WWW8 586 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 ZNF606Q8WXB4 792 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 CNBD2Q96M20 576 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 SENP6Q9GZR1 1112 aaPredicted RBP10.71□□□□□ -0.69
CLIP4-208ENST00000456385 XAB2Q9HCS7 855 aaKnown RBP10.71□□□□□ -0.69
CLIP4-208ENST00000456385 KMT5AQ9NQR1 393 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 SMYD2Q9NRG4 433 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 CIDEBQ9UHD4 219 aa10.71□□□□□ -0.69
CLIP4-208ENST00000456385 HEMK1Q9Y5R4 338 aaPredicted RBP10.71□□□□□ -0.69
CLIP4-208ENST00000456385 ASTN2O75129 1339 aaPredicted RBP10.71□□□□□ -0.7
CLIP4-208ENST00000456385 MYH9P35579 1960 aaKnown RBP10.71□□□□□ -0.7
CLIP4-208ENST00000456385 TTLL13PA6NNM8 815 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 SIN3BO75182 1162 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 TOM1L1O75674 476 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ITGBL1O95965 494 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 HNRNPCP07910 306 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 SNRPAP09012 282 aaKnown RBP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 PTPN7P35236 360 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ALDH1A3P47895 512 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ACOT2P49753 483 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 XIAPP98170 497 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 STX3Q13277 289 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 DMP1Q13316 513 aaPredicted RBP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 TBCCQ15814 346 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 DBN1Q16643 649 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 MROH9Q5TGP6 573 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 TRIM72Q6ZMU5 477 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 USP37Q86T82 979 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ARFGAP1Q8N6T3 406 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 TTC13Q8NBP0 860 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 DCUN1D1Q96GG9 259 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 PLAC1Q9HBJ0 212 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 DTNAQ9Y4J8 743 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 TTLL3Q9Y4R7 772 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 COL14A1Q05707 1796 aaKnown RBP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 SF3B1O75533 1304 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 TCRBV5S1A1TA0A578 114 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 HMX2A2RU54 273 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 TTC36A6NLP5 189 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 H3BSA7 217 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 NDC80O14777 642 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 KRT37O76014 449 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 C4BPAP04003 597 aaKnown RBP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 BPGMP07738 259 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 SETSIPP0DME0 302 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 CD1EP15812 388 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ITGAXP20702 1163 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 SLC5A2P31639 672 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 CRKP46108 304 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 WASHC5Q12768 1159 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 TAF5Q15542 800 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ZACNQ401N2 412 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ZNF394Q53GI3 561 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 VWA5B1Q5TIE3 1220 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ANGEL2Q5VTE6 544 aaKnown RBP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 NPNTQ6UXI9 565 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 FRMD7Q6ZUT3 714 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 MAVSQ7Z434 540 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 POLNQ7Z5Q5 900 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 KBTBD6Q86V97 674 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 MAP7D3Q8IWC1 876 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 KIAA0319LQ8IZA0 1049 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 NDUFAF2Q8N183 169 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 MARVELD2Q8N4S9 558 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 ACTRT2Q8TDY3 377 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 PRPF31Q8WWY3 499 aaKnown RBP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 HSPBAP1Q96EW2 488 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 CATSPER2Q96P56 530 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 BTBD9Q96Q07 612 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 PRPF18Q99633 342 aaKnown RBP10.7□□□□□ -0.7
CLIP4-208ENST00000456385 COL20A1Q9P218 1284 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 DNAJC16Q9Y2G8 782 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 NUB1Q9Y5A7 615 aa10.7□□□□□ -0.7
CLIP4-208ENST00000456385 A0A1B0GTW7 788 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 SPDYE2BA6NHP3 402 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 CASQ2O14958 399 aaPredicted RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 SPDYE6P0CI01 402 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 CSH1P0DML2 217 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 CSH2P0DML3 217 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 RBP3P10745 1247 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 EIF3EP60228 445 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 MYBPC1Q00872 1141 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 SLC25A11Q02978 314 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 CYLC2Q14093 348 aaPredicted RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 SPDYE2Q495Y8 402 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 CRY2Q49AN0 593 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 SH3D19Q5HYK7 790 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 RC3H1Q5TC82 1133 aaKnown RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 OGFRL1Q5TC84 451 aaPredicted RBP10.69□□□□□ -0.7
CLIP4-208ENST00000456385 C16orf46Q6P387 395 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 TRIM42Q8IWZ5 723 aa10.69□□□□□ -0.7
CLIP4-208ENST00000456385 PIP4K2CQ8TBX8 421 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms