RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 IZUMO3Q5VZ72 239 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 SMIM5Q71RC9 77 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 NEDD1Q8NHV4 660 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 CPNE2Q96FN4 548 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-204ENST00000455883 RNF145Q96MT1 663 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 LBHD1Q9BQE6 289 aaPredicted RBP5.38□□□□□ -1.55
CSMD3-204ENST00000455883 PAGR1Q9BTK6 254 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 FEM1BQ9UK73 627 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 PHRF1Q9P1Y6 1649 aaKnown RBP5.38□□□□□ -1.55
CSMD3-204ENST00000455883 GRIN2DO15399 1336 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 IGSF1Q8N6C5 1336 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 BAIAP3O94812 1187 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 VNN2O95498 520 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 QARSP47897 775 aaKnown RBP5.38□□□□□ -1.55
CSMD3-204ENST00000455883 NECTIN1Q15223 517 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 BROXQ5VW32 411 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 ZBED8Q8IZ13 594 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 NLGN1Q8N2Q7 840 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 YTHDF1Q9BYJ9 559 aaKnown RBP5.38□□□□□ -1.55
CSMD3-204ENST00000455883 SETD4Q9NVD3 440 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 MCUBQ9NWR8 336 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 ADAM28Q9UKQ2 775 aa5.38□□□□□ -1.55
CSMD3-204ENST00000455883 SOWAHDA6NJG2 315 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 RNF103O00237 685 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CHST10O43529 356 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 DNAJB1P25685 340 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ADD2P35612 726 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 AMPD2Q01433 879 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ERLEC1Q96DZ1 483 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 WDR41Q9HAD4 459 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NSFL1CQ9UNZ2 370 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 LAMB1P07942 1786 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 hCG_1642624A0A1W2PR95 340 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 H3BUI4 141 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NMT2O60551 498 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 GADD45BO75293 160 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 UMPSP11172 480 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PRELPP51888 382 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 SPIRE1Q08AE8 756 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ARID5BQ14865 1188 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NT5DC1Q5TFE4 455 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 METTL21CQ5VZV1 264 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NFRKBQ6P4R8 1299 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 UTS2BQ765I0 119 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 MARK2Q7KZI7 788 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 DAGLBQ8NCG7 672 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CEP170P1Q96L14 293 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ECSITQ9BQ95 431 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TMEM9Q9P0T7 183 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PTBP2Q9UKA9 531 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CCDC182A6NF36 153 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 F8VZ95 297 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TRAFD1O14545 582 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 GNB5O14775 395 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 MGRN1O60291 552 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CYP1A1P04798 512 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 MPOP05164 745 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ATP6V1C1P21283 382 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 C21orf59P57076 290 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PDXDC2PQ6P474 469 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CRELD1Q96HD1 420 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 KCNN2Q9H2S1 579 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PCDH9Q9HC56 1237 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 SIN3BO75182 1162 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CFBP00751 764 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ALDH1A3P47895 512 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 GTF2H3Q13889 308 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 VEPH1Q14D04 833 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CCDC142Q17RM4 750 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 LRRC38Q5VT99 294 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NATD1Q8N6N6 113 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PLA2G12BQ9BX93 195 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 UBE2TQ9NPD8 197 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NUP98P52948 1817 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 APOL3O95236 402 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 C7P10643 843 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 CHN1P15882 459 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 NFKB1P19838 968 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PHKA1P46020 1223 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 MAPKAPK2P49137 400 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PACS1Q6VY07 963 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 SYTL5Q8TDW5 730 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 RAB2BQ8WUD1 216 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 MSTO1Q9BUK6 570 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 BBS2Q9BXC9 721 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TRIM9Q9C026 710 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TMEM161AQ9NX61 479 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 COL15A1P39059 1388 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ROS1P08922 2347 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 LRRC53A6NM62 1247 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 HARS2P49590 506 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 RENBPP51606 427 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PSMC5P62195 406 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 TBC1D10BQ4KMP7 808 aaPredicted RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 FASTKD1Q53R41 847 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PLEKHA7Q6IQ23 1121 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 ABRAXAS1Q6UWZ7 409 aa5.37□□□□□ -1.55
CSMD3-204ENST00000455883 PRPF39Q86UA1 669 aaKnown RBP5.37□□□□□ -1.55
CSMD3-204ENST00000455883 RTKN2Q8IZC4 609 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms