RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 SLC18A1P54219 525 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 YARSP54577 528 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 PPIL2Q13356 520 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 KCNJ11Q14654 390 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 ACAP1Q15027 740 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 BANPQ8N9N5 519 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 CCDC110Q8TBZ0 833 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 CLEC4CQ8WTT0 213 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 TTC17Q96AE7 1141 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 VRTNQ9H8Y1 702 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 SNTG2Q9NY99 539 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 TUBGCP4Q9UGJ1 667 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 CENPFP49454 3210 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 APOL1O14791 398 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 LPXNO60711 386 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 APRTP07741 180 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 RPSAP08865 295 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 IL4RP24394 825 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 ADORA2AP29274 412 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 SDC4P31431 198 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 ZNF200P98182 395 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 PQLC3Q8N755 202 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 LINC01465Q8N7H1 131 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 PPM1NQ8N819 430 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 C18orf25Q96B23 403 aaPredicted RBP12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 ZMAT2Q96NC0 199 aaKnown RBP12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 FAM111AQ96PZ2 611 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 USP29Q9HBJ7 922 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 PCDH18Q9HCL0 1135 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 NME7Q9Y5B8 376 aa12.74□□□□□ -0.37
SEMA4D-213ENST00000455551 H3BRB1 525 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 ENDOD1O94919 500 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 CCNB1P14635 433 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 ALDH3A1P30838 453 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 STIP1P31948 543 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 GJA5P36382 358 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 RASA2Q15283 850 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 PLEKHG4Q58EX7 1191 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 WLSQ5T9L3 541 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 RGS9BPQ6ZS82 235 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 RFWD2Q8NHY2 731 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 DPEP3Q9H4B8 488 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 TUT1Q9H6E5 874 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 TXLNGQ9NUQ3 528 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 NR2E3Q9Y5X4 410 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 A0A0G2JND7 137 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 PYGBP11216 843 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 FAM47CQ5HY64 1035 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 OLFML1Q6UWY5 402 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 NLRP9Q7RTR0 991 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 LRRC6Q86X45 466 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 MAP7D3Q8IWC1 876 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 OR6B3Q8NGW1 331 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 UTP4Q969X6 686 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 C16orf70Q9BSU1 422 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 C2CD2Q9Y426 696 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 TEX264Q9Y6I9 313 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 PAPSS1O43252 624 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 ADORA2BP29275 332 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 YWHAZP63104 245 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 CCDC15Q0P6D6 951 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 RIPK1Q13546 671 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 GRIK4Q16099 956 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 TAF1BQ53T94 588 aaPredicted RBP12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 FYB2Q5VWT5 728 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 MAMDC4Q6UXC1 1216 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 CCDC125Q86Z20 511 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 MAGEC3Q8TD91 643 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
SEMA4D-213ENST00000455551 GABBR2O75899 941 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 PDGFRBP09619 1106 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 MTDHQ86UE4 582 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 NETO2Q8NC67 525 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 TACO1Q9BSH4 297 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 EIF2AQ9BY44 585 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 SETD4Q9NVD3 440 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 MYO18AQ92614 2054 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 IQANK1A0A1B0GTG1 560 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 A0A1B0GUA9 196 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 CXorf49A8MYA2 514 aaPredicted RBP12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 DCTN3O75935 186 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 SESTD1Q86VW0 696 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 PPTC7Q8NI37 304 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 SLC44A1Q8WWI5 657 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 PHACTR1Q9C0D0 580 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 DHX35Q9H5Z1 703 aaKnown RBP12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 MANSC1Q9H8J5 431 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 PAK5Q9P286 719 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 HESX1Q9UBX0 185 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 FETUBQ9UGM5 382 aa12.72□□□□□ -0.37
SEMA4D-213ENST00000455551 TRIM49D1C9J1S8 452 aa12.71□□□□□ -0.37
SEMA4D-213ENST00000455551 UGT1A9O60656 530 aa12.71□□□□□ -0.37
SEMA4D-213ENST00000455551 LCP1P13796 627 aa12.71□□□□□ -0.37
SEMA4D-213ENST00000455551 CCDC130P13994 396 aa12.71□□□□□ -0.37
SEMA4D-213ENST00000455551 HDAC4P56524 1084 aa12.71□□□□□ -0.37
SEMA4D-213ENST00000455551 SLC6A3Q01959 620 aa12.71□□□□□ -0.37
SEMA4D-213ENST00000455551 GBE1Q04446 702 aa12.71□□□□□ -0.37
SEMA4D-213ENST00000455551 POU5F1BQ06416 359 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms