RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 PTP4A3O75365 173 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 HEXIM1O94992 359 aaKnown RBP4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 ELANEP08246 267 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 MED14OSP0DP75 135 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 RPS6KB1P23443 525 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 PGDP52209 483 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 ATXN1P54253 815 aaKnown RBP4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 ZNF844Q08AG5 666 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 MESP2Q0VG99 397 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 GRM7Q14831 915 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 ACOX1Q15067 660 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 VMACQ2NL98 169 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 PRICKLE4Q2TBC4 344 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 METTL24Q5JXM2 366 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 ARHGAP40Q5TG30 622 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 ARMC3Q5W041 872 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 RGS7BPQ6MZT1 257 aaPredicted RBP4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 CLEC9AQ6UXN8 241 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 LRRC55Q6ZSA7 311 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 R3HCC1LQ7Z5L2 792 aaKnown RBP4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 SPARTQ8N0X7 666 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 FAM109AQ8N4B1 249 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 LRRC71Q8N4P6 559 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 LSMEM1Q8N8F7 131 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 LINS1Q8NG48 757 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 KCNG4Q8TDN1 519 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 WDR60Q8WVS4 1066 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 HMGB4Q8WW32 186 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 PNKPQ96T60 521 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 ZSWIM1Q9BR11 485 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 PAAF1Q9BRP4 392 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 PLEKHA2Q9HB19 425 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 ZDHHC7Q9NXF8 308 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 NDUFAF4Q9P032 175 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 RIMKLBQ9ULI2 386 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 TBX20Q9UMR3 447 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 USP22Q9UPT9 525 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 PCDHB7Q9Y5E2 793 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 SNX14Q9Y5W7 946 aa4.72□□□□□ -1.65
HMGN3P1-201ENST00000453847 GXYLT2A0PJZ3 443 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 EFCAB8A8MWE9 144 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 TCERG1O14776 1098 aaKnown RBP4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 ORC4O43929 436 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 CDC14BO60729 498 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 TIPRLO75663 272 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 PEPDP12955 493 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 KCNA2P16389 499 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 JUNBP17275 347 aaPredicted RBP4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 GNAT2P19087 354 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 FGFR4P22455 802 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 HOXD12P35452 270 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 PBX1P40424 430 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 POLD2P49005 469 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 GATMP50440 423 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 RBM5P52756 815 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 RABGGTBP53611 331 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 PRKAG1P54619 331 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 DRG2P55039 364 aaKnown RBP4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 NHLH2Q02577 135 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 SF3A3Q12874 501 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 CCNIQ14094 377 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 NFIXQ14938 502 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 ANKRD1Q15327 319 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 RPS6KA2Q15349 733 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 CTXN3Q4LDR2 81 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 SNX30Q5VWJ9 437 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 DGAT2L7PQ6IED9 249 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 ANO7Q6IWH7 933 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 LAYNQ6UX15 382 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 ABRAQ8N0Z2 381 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 C11orf44Q8N8P7 122 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 USP38Q8NB14 1042 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 SLC22A17Q8WUG5 538 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 CPT1BQ92523 772 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 STAMQ92783 540 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 SDF4Q9BRK5 362 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 LMAN2LQ9H0V9 348 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 MEGF9Q9H1U4 602 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 TLR8Q9NR97 1041 aaKnown RBP4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 PLA2G3Q9NZ20 509 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 ZBTB1Q9Y2K1 713 aa4.71□□□□□ -1.66
HMGN3P1-201ENST00000453847 TDRD9Q8NDG6 1382 aaKnown RBP4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 A0A1B0GTW7 788 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 E7ENX8 843 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 H3BNC9 293 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 KIAA0355O15063 1070 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 CTIFO43310 598 aaKnown RBP4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 NOBOXO60393 691 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 ZBED4O75132 1171 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 URI1O94763 535 aaPredicted RBP4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 VNN1O95497 513 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 MLYCDO95822 493 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 F9P00740 461 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 INHBBP09529 407 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 CPA1P15085 419 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 MGAT1P26572 445 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 PPIFP30405 207 aaKnown RBP4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 HOXD13P35453 343 aa4.7□□□□□ -1.66
HMGN3P1-201ENST00000453847 RGS2P41220 211 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms