RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 NAT16Q8N8M0 369 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 OLIG1Q8TAK6 271 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 SMARCD1Q96GM5 515 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 NACA2Q9H009 215 aa12.39□□□□□ -0.43
GARNL3-210ENST00000453030 POLMQ9NP87 494 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-210ENST00000453030 CHORDC1Q9UHD1 332 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-210ENST00000453030 PCDH15Q96QU1 1955 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 E2F8A0AVK6 867 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 LRRIQ3A6PVS8 624 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-210ENST00000453030 MAP3K13O43283 966 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 ADAM23O75077 832 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 AP1G2O75843 785 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 CCDC130P13994 396 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 GRIA2P42262 883 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 PTGER3P43115 390 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 KIR2DL1P43626 348 aaPredicted RBP12.38□□□□□ -0.43
GARNL3-210ENST00000453030 MAPK8P45983 427 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 SNRPFP62306 86 aaKnown RBP12.38□□□□□ -0.43
GARNL3-210ENST00000453030 IRX4P78413 519 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 CUL4BQ13620 913 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 NCOA4Q13772 614 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 KNOP1Q1ED39 458 aaKnown RBP12.38□□□□□ -0.43
GARNL3-210ENST00000453030 ANO4Q32M45 955 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 TRIM61Q5EBN2 209 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 BTBD8Q5XKL5 378 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 LPCAT2Q7L5N7 544 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 ACOT1Q86TX2 421 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 BBS7Q8IWZ6 715 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 PHTF2Q8N3S3 785 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 OVCA2Q8WZ82 227 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 WBP2Q969T9 261 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 ERLEC1Q96DZ1 483 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 SDCBP2Q9H190 292 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 TBC1D14Q9P2M4 693 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 HMGXB4Q9UGU5 601 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 ZFYVE26Q68DK2 2539 aa12.38□□□□□ -0.43
GARNL3-210ENST00000453030 TBC1D3BA6NDS4 549 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 CDX4O14627 284 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-210ENST00000453030 TNFRSF10BO14763 440 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 TULP3O75386 442 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 VNN1O95497 513 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 FAM163BP0C2L3 166 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 SPINK2P20155 84 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 WASP42768 502 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 ME1P48163 572 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 GAD2Q05329 585 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 HSF5Q4G112 596 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-210ENST00000453030 C10orf76Q5T2E6 689 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 PAQR9Q6ZVX9 377 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 ETFBKMTQ8IXQ9 262 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 C12orf56Q8IXR9 622 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 FUKQ8N0W3 1084 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 ZNF513Q8N8E2 541 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-210ENST00000453030 PARD3BQ8TEW8 1205 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 JAKMIP2Q96AA8 810 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 OTUB2Q96DC9 234 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 TNIP3Q96KP6 325 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.43
GARNL3-210ENST00000453030 FAM49BQ9NUQ9 324 aa12.37□□□□□ -0.43
GARNL3-210ENST00000453030 CGNQ9P2M7 1197 aaKnown RBP12.37□□□□□ -0.43
GARNL3-210ENST00000453030 MBD1Q9UIS9 605 aaPredicted RBP12.37□□□□□ -0.43
GARNL3-210ENST00000453030 C1QTNF9BB2RNN3 333 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 TRIM24O15164 1050 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 HOXC11O43248 304 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-210ENST00000453030 TLR5O60602 858 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 BEST1O76090 585 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 TOP3BO95985 862 aaKnown RBP12.36□□□□□ -0.43
GARNL3-210ENST00000453030 C1QTNF9P0C862 333 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 HOXB2P14652 356 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 TNFRSF4P43489 277 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 PGFP49763 221 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 TUBP50607 506 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 MAP3K7CLP57077 242 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 DLG4P78352 724 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 MAP7D1Q3KQU3 841 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 LYSMD4Q5XG99 296 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 CEP57L1Q8IYX8 460 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 DEFB119Q8N690 84 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 TERB1Q8NA31 727 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 KIAA0895Q8NCT3 520 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 DEFB124Q8NES8 71 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 ZMIZ2Q8NF64 920 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 GOLGA5Q8TBA6 731 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 SLC2A14Q8TDB8 520 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 SMOQ99835 787 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 NUSAP1Q9BXS6 441 aaKnown RBP12.36□□□□□ -0.43
GARNL3-210ENST00000453030 FSCN3Q9NQT6 498 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 SPHK2Q9NRA0 654 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 TMEM74BQ9NUR3 256 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 EXOC1Q9NV70 894 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 DNAJC17Q9NVM6 304 aaKnown RBP12.36□□□□□ -0.43
GARNL3-210ENST00000453030 FAM13BQ9NYF5 915 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 DEC1Q9P2X7 70 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 RALYQ9UKM9 306 aaKnown RBP12.36□□□□□ -0.43
GARNL3-210ENST00000453030 PCDHA7Q9UN72 937 aa12.36□□□□□ -0.43
GARNL3-210ENST00000453030 PVALEFA0A1B0GWK0 134 aa12.35□□□□□ -0.43
GARNL3-210ENST00000453030 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
GARNL3-210ENST00000453030 TBX18O95935 607 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms