RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TMEM265A0A087WTH1 108 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 EPOPA6NHQ4 379 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 HOXA2O43364 376 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 LRCH4O75427 683 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 HPDP32754 393 aaPredicted RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 CHKAP35790 457 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 MDH1P40925 334 aaKnown RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 GUCY1A3Q02108 690 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 TFDP3Q5H9I0 405 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 KAZNQ674X7 775 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 LCLAT1Q6UWP7 414 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 TRMT10CQ7L0Y3 403 aaKnown RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 ARNTL2Q8WYA1 636 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 PGM2Q96G03 612 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 GAD1Q99259 594 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 CWC15Q9P013 229 aaKnown RBP11.23□□□□□ -0.61
PKP4-206ENST00000452162 KLK14Q9P0G3 267 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 BCCIPQ9P287 314 aaKnown RBP eCLIP11.23□□□□□ -0.61
PKP4-206ENST00000452162 KIAA1257Q9ULG3 409 aa11.23□□□□□ -0.61
PKP4-206ENST00000452162 PDCD11Q14690 1871 aaKnown RBP11.22□□□□□ -0.61
PKP4-206ENST00000452162 LRRD1A4D1F6 860 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 RFXAPO00287 272 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 PPEF2O14830 753 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 IL1R2P27930 398 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 LSP1P33241 339 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 MLH1P40692 756 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 MAGOHP61326 146 aaKnown RBP11.22□□□□□ -0.61
PKP4-206ENST00000452162 ERVK-21P61565 698 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 MYO1EQ12965 1108 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 TAZQ16635 292 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 ZFYVE27Q5T4F4 411 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 GLB1LQ6UWU2 654 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 ALKAL1Q6UXT8 129 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 CCDC25Q86WR0 208 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 EMC1Q8N766 993 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 CCDC89Q8N998 374 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 ZFP42Q96MM3 310 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 TGS1Q96RS0 853 aaKnown RBP11.22□□□□□ -0.61
PKP4-206ENST00000452162 NT5C1AQ9BXI3 368 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 CDC42EP4Q9H3Q1 356 aaKnown RBP11.22□□□□□ -0.61
PKP4-206ENST00000452162 CWH43Q9H720 699 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 SYNCQ9H7C4 482 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 MIOSQ9NXC5 875 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 TUBGCP4Q9UGJ1 667 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 DNPEPQ9ULA0 475 aa11.22□□□□□ -0.61
PKP4-206ENST00000452162 KRT7P08729 469 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 ADCY8P40145 1251 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 PPP2R2AP63151 447 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 LMNB2Q03252 620 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 OASLQ15646 514 aaKnown RBP11.21□□□□□ -0.61
PKP4-206ENST00000452162 NOMO2Q5JPE7 1267 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 LRRC52Q8N7C0 313 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 BBOF1Q8ND07 529 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 UBA3Q8TBC4 463 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 CLP1Q92989 425 aaKnown RBP11.21□□□□□ -0.61
PKP4-206ENST00000452162 TSPYL1Q9H0U9 437 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 PRDM12Q9H4Q4 367 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 TBC1D13Q9NVG8 400 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 CNTN3Q9P232 1028 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 ANAPC5Q9UJX4 755 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 EFR3BQ9Y2G0 817 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 COL4A4P53420 1690 aaPredicted RBP11.21□□□□□ -0.61
PKP4-206ENST00000452162 SCN1AP35498 2009 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 PLXNA4Q9HCM2 1894 aa11.21□□□□□ -0.61
PKP4-206ENST00000452162 ARL5CA6NH57 179 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 SRRM3A6NNA2 597 aaPredicted RBP11.21□□□□□ -0.62
PKP4-206ENST00000452162 B4GALT3O60512 393 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 RECQL4O94761 1208 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 POMCP01189 267 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 VPS41P49754 854 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 BYSLQ13895 437 aaKnown RBP11.21□□□□□ -0.62
PKP4-206ENST00000452162 CROCCP2Q86T23 111 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 LRRC43Q8N309 656 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 ALLCQ8N6M5 410 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 GSTCDQ8NEC7 633 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 NKD2Q969F2 451 aaPredicted RBP11.21□□□□□ -0.62
PKP4-206ENST00000452162 C18orf25Q96B23 403 aaPredicted RBP11.21□□□□□ -0.62
PKP4-206ENST00000452162 MRPL45Q9BRJ2 306 aaKnown RBP11.21□□□□□ -0.62
PKP4-206ENST00000452162 DDX23Q9BUQ8 820 aaKnown RBP11.21□□□□□ -0.62
PKP4-206ENST00000452162 TSPAN16Q9UKR8 245 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 DRG1Q9Y295 367 aaKnown RBP11.21□□□□□ -0.62
PKP4-206ENST00000452162 GIT1Q9Y2X7 761 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 NME7Q9Y5B8 376 aa11.21□□□□□ -0.62
PKP4-206ENST00000452162 PBX3P40426 434 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 SCNN1GP51170 649 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 YARSP54577 528 aaKnown RBP11.2□□□□□ -0.62
PKP4-206ENST00000452162 VCPP55072 806 aaKnown RBP11.2□□□□□ -0.62
PKP4-206ENST00000452162 ACAP1Q15027 740 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 STILQ15468 1287 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 HADHQ16836 314 aaKnown RBP11.2□□□□□ -0.62
PKP4-206ENST00000452162 GOLGA7BQ2TAP0 167 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 PKDCCQ504Y2 493 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 ODF2Q5BJF6 829 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 TNFAIP8L3Q5GJ75 292 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 SPOUT1Q5T280 376 aaKnown RBP11.2□□□□□ -0.62
PKP4-206ENST00000452162 IZUMO3Q5VZ72 239 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 HIBCHQ6NVY1 386 aaPredicted RBP11.2□□□□□ -0.62
PKP4-206ENST00000452162 PRUNE1Q86TP1 453 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 HACE1Q8IYU2 909 aa11.2□□□□□ -0.62
PKP4-206ENST00000452162 GLIS1Q8NBF1 620 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms