RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SPTBN4Q9H254 2564 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 HRO43593 1189 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 ADH1CP00326 375 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 RETP07949 1114 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 ASPAP45381 313 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 SEC13P55735 322 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 NCAPHQ15003 741 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 RSPO4Q2I0M5 234 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-208ENST00000451893 TCERG1LQ5VWI1 586 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 KRT39Q6A163 491 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 PKN3Q6P5Z2 889 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 SMYD4Q8IYR2 804 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-208ENST00000451893 FUKQ8N0W3 1084 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 PPP1R9BQ96SB3 815 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 NIF3L1Q9GZT8 377 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 CYP3A43Q9HB55 503 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 TMEM8AQ9HCN3 771 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 TLR8Q9NR97 1041 aaKnown RBP22.87■■□□□ 1.25
C9orf3-208ENST00000451893 C2orf42Q9NWW7 574 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 GMIPQ9P107 970 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 HMGXB4Q9UGU5 601 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 RWDD2AQ9UIY3 292 aa22.87■■□□□ 1.25
C9orf3-208ENST00000451893 PRR5-ARHGAP8B1AHC4 643 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 PSMA7O14818 248 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 RPP40O75818 363 aaKnown RBP22.86■■□□□ 1.25
C9orf3-208ENST00000451893 MXI1P50539 228 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 ARHGAP8P85298 464 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 GOLGA8FQ08AF8 430 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 GOLGA8DPQ0D2H9 430 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 EDRF1Q3B7T1 1238 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 DCAF17Q5H9S7 520 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-208ENST00000451893 NAIF1Q69YI7 327 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-208ENST00000451893 FOXR2Q6PJQ5 311 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 C12orf29Q8N999 325 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 TAS1R2Q8TE23 839 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 HHIPQ96QV1 700 aa22.86■■□□□ 1.25
C9orf3-208ENST00000451893 FBRSL1Q9HCM7 1045 aaKnown RBP22.86■■□□□ 1.25
C9orf3-208ENST00000451893 COCHO43405 550 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 OLFM2O95897 454 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 IRF1P10914 325 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 HOXA6P31267 233 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 GTF2H1P32780 548 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 ENPEPQ07075 957 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 PPP3CAQ08209 521 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 BTBD8Q5XKL5 378 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 CRYBG2Q8N1P7 616 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 CAMKK1Q8N5S9 505 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 KIAA1958Q8N8K9 716 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 CYFIP2Q96F07 1278 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 EEF2KMTQ96G04 330 aa22.85■■□□□ 1.25
C9orf3-208ENST00000451893 BICDL2A1A5D9 508 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 APODP05090 189 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 CYP17A1P05093 508 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 ADH5P11766 374 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 PRCPP42785 496 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 PAK1Q13153 545 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 DMC1Q14565 340 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 DHCR24Q15392 516 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 C1orf220Q5T0J3 134 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 PAQR9Q6ZVX9 377 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 TTC30AQ86WT1 665 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 PDLIM2Q96JY6 352 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 SMOQ99835 787 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 CCSER2Q9H7U1 834 aa22.84■■□□□ 1.25
C9orf3-208ENST00000451893 E2F8A0AVK6 867 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.83■■□□□ 1.25
C9orf3-208ENST00000451893 AXIN1O15169 862 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 APBB3O95704 486 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 CD44P16070 742 aaKnown RBP22.83■■□□□ 1.25
C9orf3-208ENST00000451893 TUBP50607 506 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 ZXDBP98169 803 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 ZNF394Q53GI3 561 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 C2orf27AQ580R0 203 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 SYT13Q7L8C5 426 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 CACNA2D4Q7Z3S7 1137 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 TTC39CQ8N584 583 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 TSTD1Q8NFU3 115 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 GAB3Q8WWW8 586 aa22.83■■□□□ 1.25
C9orf3-208ENST00000451893 LSM7Q9UK45 103 aaKnown RBP22.83■■□□□ 1.25
C9orf3-208ENST00000451893 SPAG17Q6Q759 2223 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 GPR179Q6PRD1 2367 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 MYOFQ9NZM1 2061 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 CCDC163A0A0D9SF12 145 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 TNFRSF10BO14763 440 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 TLR5O60602 858 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 LRP3O75074 770 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 ACO1P21399 889 aaKnown RBP22.82■■□□□ 1.24
C9orf3-208ENST00000451893 DGKEP52429 567 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 SLC8A3P57103 927 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 GAD2Q05329 585 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 INCA1Q0VD86 236 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 ANO4Q32M45 955 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 PREPLQ4J6C6 727 aaPredicted RBP22.82■■□□□ 1.24
C9orf3-208ENST00000451893 NUDT18Q6ZVK8 323 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 FAM160A2Q8N612 972 aaPredicted RBP22.82■■□□□ 1.24
C9orf3-208ENST00000451893 FBXL13Q8NEE6 735 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 OTUB2Q96DC9 234 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 HEXIM2Q96MH2 286 aaKnown RBP22.82■■□□□ 1.24
C9orf3-208ENST00000451893 PNKPQ96T60 521 aa22.82■■□□□ 1.24
C9orf3-208ENST00000451893 HNRNPABQ99729 332 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms