RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 DNAAF5Q86Y56 855 aa25.27■■□□□ 1.64
CPSF4-207ENST00000451876 SCML4Q8N228 414 aa25.27■■□□□ 1.64
CPSF4-207ENST00000451876 IPO4Q8TEX9 1081 aaKnown RBP25.27■■□□□ 1.64
CPSF4-207ENST00000451876 MRPS31Q92665 395 aaKnown RBP25.27■■□□□ 1.64
CPSF4-207ENST00000451876 MCRS1Q96EZ8 462 aa25.27■■□□□ 1.64
CPSF4-207ENST00000451876 TLR8Q9NR97 1041 aaKnown RBP25.27■■□□□ 1.64
CPSF4-207ENST00000451876 ZNHIT6Q9NWK9 470 aaKnown RBP25.27■■□□□ 1.64
CPSF4-207ENST00000451876 IMPACTQ9P2X3 320 aa25.27■■□□□ 1.64
CPSF4-207ENST00000451876 FAM50BQ9Y247 325 aa25.27■■□□□ 1.64
CPSF4-207ENST00000451876 GBP2P32456 591 aaPredicted RBP25.26■■□□□ 1.63
CPSF4-207ENST00000451876 NSFP46459 744 aaKnown RBP25.26■■□□□ 1.63
CPSF4-207ENST00000451876 TSR1Q2NL82 804 aaKnown RBP25.26■■□□□ 1.63
CPSF4-207ENST00000451876 SNX30Q5VWJ9 437 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 MMS22LQ6ZRQ5 1243 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 HFE2Q6ZVN8 426 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 FAM183BPQ6ZVS7 135 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 MON1AQ86VX9 555 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 MAB21L3Q8N8X9 362 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 ASB2Q96Q27 587 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 SLC22A12Q96S37 553 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 SLITRK6Q9H5Y7 841 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 SYNCQ9H7C4 482 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 TRPC7Q9HCX4 862 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.26■■□□□ 1.63
CPSF4-207ENST00000451876 CDH7Q9ULB5 785 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 TMCO5BA8MYB1 307 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 MMP8P22894 467 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 EIF4A3P38919 411 aaKnown RBP25.26■■□□□ 1.63
CPSF4-207ENST00000451876 PPP3CCP48454 512 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 RPGRIP1Q96KN7 1286 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 C11orf70Q9BRQ4 267 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.26■■□□□ 1.63
CPSF4-207ENST00000451876 SLC46A2Q9BY10 475 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 CCSER2Q9H7U1 834 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 NAGPAQ9UK23 515 aa25.26■■□□□ 1.63
CPSF4-207ENST00000451876 A0A087X0T9 212 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 C2CD4DB7Z1M9 353 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 FBXO21O94952 628 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 FAM228BP0C875 321 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 GABRB2P47870 512 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 YWHAGP61981 247 aaKnown RBP eCLIP25.25■■□□□ 1.63
CPSF4-207ENST00000451876 PTP4A2Q12974 167 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 ARHGAP15Q53QZ3 475 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 OLFML1Q6UWY5 402 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 PHF13Q86YI8 300 aaPredicted RBP25.25■■□□□ 1.63
CPSF4-207ENST00000451876 ST13P5Q8NFI4 369 aaPredicted RBP25.25■■□□□ 1.63
CPSF4-207ENST00000451876 TASP1Q9H6P5 420 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 USTQ9Y2C2 406 aa25.25■■□□□ 1.63
CPSF4-207ENST00000451876 OAS1P00973 400 aaKnown RBP25.24■■□□□ 1.63
CPSF4-207ENST00000451876 BMP1P13497 986 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 MAPK8IP2Q13387 824 aaPredicted RBP25.24■■□□□ 1.63
CPSF4-207ENST00000451876 ASTE1Q2TB18 679 aaPredicted RBP25.24■■□□□ 1.63
CPSF4-207ENST00000451876 ACAD10Q6JQN1 1059 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 MON1BQ7L1V2 547 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 OTOP3Q7RTS5 596 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 XYLT1Q86Y38 959 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 IRGQQ8WZA9 623 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 C18orf8Q96DM3 657 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 CYP2S1Q96SQ9 504 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 NUDT5Q9UKK9 219 aa25.24■■□□□ 1.63
CPSF4-207ENST00000451876 SSU72P8A0A1W2PR75 194 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 LAMP2P13473 410 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 CDK17Q00537 523 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 TAF5Q15542 800 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 OR6B2Q6IFH4 312 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 VPS36Q86VN1 386 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 PANX2Q96RD6 677 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 RNF38Q9H0F5 515 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.23■■□□□ 1.63
CPSF4-207ENST00000451876 GDE1Q9NZC3 331 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 TLR5O60602 858 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 PSEN1P49768 467 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 GFPT1Q06210 699 aaPredicted RBP25.23■■□□□ 1.63
CPSF4-207ENST00000451876 BSPRYQ5W0U4 402 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.23■■□□□ 1.63
CPSF4-207ENST00000451876 ARL14EPQ8N8R7 260 aaPredicted RBP25.23■■□□□ 1.63
CPSF4-207ENST00000451876 TDRD5Q8NAT2 981 aaKnown RBP25.23■■□□□ 1.63
CPSF4-207ENST00000451876 MSANTD4Q8NCY6 345 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 ZSCAN18Q8TBC5 510 aaPredicted RBP25.23■■□□□ 1.63
CPSF4-207ENST00000451876 EDEM1Q92611 657 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 FAM149B1Q96BN6 582 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 SMG9Q9H0W8 520 aaKnown RBP25.23■■□□□ 1.63
CPSF4-207ENST00000451876 NHEJ1Q9H9Q4 299 aaPredicted RBP25.23■■□□□ 1.63
CPSF4-207ENST00000451876 CLIC5Q9NZA1 410 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 ADAM22Q9P0K1 906 aa25.23■■□□□ 1.63
CPSF4-207ENST00000451876 COCHO43405 550 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 OLFM2O95897 454 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 TBX18O95935 607 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 LTFP02788 710 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 GZMAP12544 262 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 RARGP13631 454 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 DDX6P26196 483 aaKnown RBP eCLIP25.22■■□□□ 1.63
CPSF4-207ENST00000451876 TUBP50607 506 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 FAM78AQ5JUQ0 283 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 HECTD3Q5T447 861 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 PHLDB2Q86SQ0 1253 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 CMTM8Q8IZV2 173 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 ARHGAP18Q8N392 663 aa25.22■■□□□ 1.63
CPSF4-207ENST00000451876 ACSF2Q96CM8 615 aaPredicted RBP25.22■■□□□ 1.63
CPSF4-207ENST00000451876 ASB16Q96NS5 453 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms