RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 TNNC1P63316 161 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 SLC7A9P82251 487 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 CRY1Q16526 586 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 USP39Q53GS9 565 aaKnown RBP10.8□□□□□ -0.68
LINC01004-202ENST00000450686 FAM26FQ5R3K3 315 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 SHC4Q6S5L8 630 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 RASSF3Q86WH2 238 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 ADGRG2Q8IZP9 1017 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 LINC00301Q8NCQ3 95 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 DEFB124Q8NES8 71 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 OR2I1PQ8NGU4 316 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 SPATA18Q8TC71 538 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 HMGB4Q8WW32 186 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 DDX1Q92499 740 aaKnown RBP10.8□□□□□ -0.68
LINC01004-202ENST00000450686 FBXO32Q969P5 355 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 ZFRQ96KR1 1074 aaKnown RBP10.8□□□□□ -0.68
LINC01004-202ENST00000450686 CNOT6LQ96LI5 555 aaKnown RBP10.8□□□□□ -0.68
LINC01004-202ENST00000450686 MED10Q9BTT4 135 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 XYLT2Q9H1B5 865 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 SLC39A2Q9NP94 309 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 TMEM74BQ9NUR3 256 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 GMIPQ9P107 970 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 BCCIPQ9P287 314 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC01004-202ENST00000450686 HMGXB4Q9UGU5 601 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 HCN2Q9UL51 889 aa10.8□□□□□ -0.68
LINC01004-202ENST00000450686 TCRBV21S2A2A0A5A6 115 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 CDX4O14627 284 aaPredicted RBP10.79□□□□□ -0.68
LINC01004-202ENST00000450686 KHNYNO15037 678 aaKnown RBP10.79□□□□□ -0.68
LINC01004-202ENST00000450686 SPTLC2O15270 562 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 STX6O43752 255 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 OLFM2O95897 454 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 ADH5P11766 374 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 TCF3P15923 654 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 AFMP43652 599 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 PRSS12P56730 875 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 NOP14P78316 857 aaKnown RBP10.79□□□□□ -0.68
LINC01004-202ENST00000450686 CUL4BQ13620 913 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 PSMD6Q15008 389 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 TDRD10Q5VZ19 366 aaKnown RBP10.79□□□□□ -0.68
LINC01004-202ENST00000450686 PAQR9Q6ZVX9 377 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 DPH6Q7L8W6 267 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 FAM35AQ86V20 835 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 MIB1Q86YT6 1006 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 BBS7Q8IWZ6 715 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 PHTF2Q8N3S3 785 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 B3GALNT2Q8NCR0 500 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 ZNF507Q8TCN5 953 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 JAKMIP2Q96AA8 810 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 C8orf48Q96LL4 319 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 PNKPQ96T60 521 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 SLC6A17Q9H1V8 727 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 TNMDQ9H2S6 317 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 CD93Q9NPY3 652 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 ARHGEF4Q9NR80 690 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 KBTBD4Q9NVX7 518 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 PLXND1Q9Y4D7 1925 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 ATRXP46100 2492 aa10.79□□□□□ -0.68
LINC01004-202ENST00000450686 ANKRD11Q6UB99 2663 aaPredicted RBP10.78□□□□□ -0.68
LINC01004-202ENST00000450686 MDM4O15151 490 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 TACC1O75410 805 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 BEST1O76090 585 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 VNN1O95497 513 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 TBX18O95935 607 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 APODP05090 189 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 ITPKAP23677 461 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 YWHAQP27348 245 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 KIR2DL1P43626 348 aaPredicted RBP10.78□□□□□ -0.68
LINC01004-202ENST00000450686 SLC5A3P53794 718 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 DLG4P78352 724 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 SHC2P98077 582 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 BIRC3Q13489 604 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 TRPC3Q13507 836 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 SURF1Q15526 300 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 MAPRE1Q15691 268 aaKnown RBP10.78□□□□□ -0.68
LINC01004-202ENST00000450686 ANO4Q32M45 955 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 TRIM61Q5EBN2 209 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 SPOPLQ6IQ16 392 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 STXBP4Q6ZWJ1 553 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 GPRIN1Q7Z2K8 1008 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 ACOT1Q86TX2 421 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 TMEM25Q86YD3 366 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 NUP93Q8N1F7 819 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 PGBD3Q8N328 593 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 XXYLT1Q8NBI6 393 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 OLIG1Q8TAK6 271 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 BHMTQ93088 406 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 EXOC4Q96A65 974 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 P2RY11Q96G91 374 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 SLITRK1Q96PX8 696 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 ACOX2Q99424 681 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 ELOVL4Q9GZR5 314 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 TMEM9BQ9NQ34 198 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 KRT82Q9NSB4 513 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 FAM49BQ9NUQ9 324 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 RABGEF1Q9UJ41 708 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 PCNX2A6NKB5 2137 aa10.78□□□□□ -0.68
LINC01004-202ENST00000450686 BAHCC1Q9P281 2608 aa10.77□□□□□ -0.68
LINC01004-202ENST00000450686 SPAARA0A1B0GVQ0 90 aa10.77□□□□□ -0.69
LINC01004-202ENST00000450686 LRRIQ3A6PVS8 624 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms