RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MT-ND3P03897 115 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CYP1A2P05177 515 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 IL2RBP14784 551 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 PSMC3P17980 439 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A6P19224 532 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A1P22309 533 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A4P22310 534 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A3P35503 534 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A5P35504 534 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CDKL1Q00532 357 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CBWD6Q4V339 395 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CBWD3Q5JTY5 395 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CBWD5Q5RIA9 395 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 NSMFQ6X4W1 530 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 VASH1Q7L8A9 365 aaPredicted RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 GJA10Q969M2 543 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 NAP1L4Q99733 375 aaKnown RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 SH3GL1Q99961 368 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 DHRS4Q9BTZ2 278 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 HEMGNQ9BXL5 484 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 SLC2A11Q9BYW1 496 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 MRPL46Q9H2W6 279 aaKnown RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A7Q9HAW7 530 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A10Q9HAW8 530 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 UGT1A8Q9HAW9 530 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 MARCOQ9UEW3 520 aaPredicted RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 GNPTGQ9UJJ9 305 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CDH7Q9ULB5 785 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 PPME1Q9Y570 386 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 SCINQ9Y6U3 715 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 ATRNL1Q5VV63 1379 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 NFASCO94856 1347 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 EMSYQ7Z589 1322 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 KCPQ6ZWJ8 1503 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 POTEB3A0JP26 581 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 ZNF701M0R085 212 aaPredicted RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 PSMD12O00232 456 aaPredicted RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 MARCH6O60337 910 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 FBXO21O94952 628 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CFHP08603 1231 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 KITP10721 976 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 HSPA8P11142 646 aaKnown RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 RALAP11233 206 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 PSMC2P35998 433 aaKnown RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 GPX6P59796 221 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 IGBP1P78318 339 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 TFAP4Q01664 338 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CDK18Q07002 472 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 KLF1Q13351 362 aaPredicted RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 TFDP1Q14186 410 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 ADGRE1Q14246 886 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 NR1D2Q14995 579 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 KCNJ8Q15842 424 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CYP2A13Q16696 494 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 FAM209AQ5JX71 171 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 POTEBQ6S5H4 581 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 ZNF804AQ7Z570 1209 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 TICAM1Q8IUC6 712 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CLVS1Q8IUQ0 354 aaPredicted RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 ANKMY2Q8IV38 441 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 FBXW8Q8N3Y1 598 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 PCYOX1LQ8NBM8 494 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 ADCY4Q8NFM4 1077 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 C12orf43Q96C57 262 aaKnown RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 ZNF512Q96ME7 567 aaPredicted RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 PCDHB18PQ96TA0 734 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CTRCQ99895 268 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 CPVLQ9H3G5 476 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.94□□□□□ -0.98
LSM5-208ENST00000450169 ITM2BQ9Y287 266 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 TMA7Q9Y2S6 64 aaKnown RBP8.94□□□□□ -0.98
LSM5-208ENST00000450169 A0A1B0GUL6 1792 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 LRP5O75197 1615 aa8.94□□□□□ -0.98
LSM5-208ENST00000450169 ZBBXA8MT70 800 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 UBAP1LF5GYI3 381 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 H6PDO95479 791 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 INHBBP09529 407 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 CYP2D6P10635 497 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 GZMAP12544 262 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 CCDC130P13994 396 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 TCF3P15923 654 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 ATP2B4P23634 1241 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 RCVRNP35243 200 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 NDST2P52849 883 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 TUBA4AP68366 448 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 TMPRSS15P98073 1019 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 MYL7Q01449 175 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 BST1Q10588 318 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 KLHL38Q2WGJ6 581 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 GPR141Q7Z602 305 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 DEFB107AQ8IZN7 70 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 ZNF713Q8N859 430 aaPredicted RBP8.93□□□□□ -0.98
LSM5-208ENST00000450169 ANKK1Q8NFD2 765 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 PPP1R14CQ8TAE6 165 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 TBC1D15Q8TC07 691 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 DCAKDQ8WVC6 231 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 CCDC138Q96M89 665 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 OLFM1Q99784 485 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 ANO3Q9BYT9 981 aa8.93□□□□□ -0.98
LSM5-208ENST00000450169 INO80BQ9C086 356 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms