RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 RHBDF2Q6PJF5 856 aa18.32■□□□□ 0.52
CLTCL1-203ENST00000449918 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.32■□□□□ 0.52
CLTCL1-203ENST00000449918 JAKMIP2Q96AA8 810 aa18.32■□□□□ 0.52
CLTCL1-203ENST00000449918 TMEM176AQ96HP8 235 aa18.32■□□□□ 0.52
CLTCL1-203ENST00000449918 ZFRQ96KR1 1074 aaKnown RBP18.32■□□□□ 0.52
CLTCL1-203ENST00000449918 DUSP9Q99956 384 aaKnown RBP18.32■□□□□ 0.52
CLTCL1-203ENST00000449918 DUSP16Q9BY84 665 aa18.32■□□□□ 0.52
CLTCL1-203ENST00000449918 METTL14Q9HCE5 456 aaKnown RBP18.32■□□□□ 0.52
CLTCL1-203ENST00000449918 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 ADH5P11766 374 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 ATP5C1P36542 298 aaKnown RBP18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 PXNP49023 591 aaPredicted RBP18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 SLC8A3P57103 927 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 LMNB2Q03252 620 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 GAD2Q05329 585 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 CBWD6Q4V339 395 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 CBWD3Q5JTY5 395 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 CBWD5Q5RIA9 395 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 PPP1R26Q5T8A7 1209 aaPredicted RBP18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 BTBD8Q5XKL5 378 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 ERMP1Q7Z2K6 904 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 TADA2BQ86TJ2 420 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 GAB3Q8WWW8 586 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 EZH1Q92800 747 aaPredicted RBP18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 RMDN1Q96DB5 314 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 PNKPQ96T60 521 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 CYLDQ9NQC7 956 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 MAN1B1Q9UKM7 699 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 USP18Q9UMW8 372 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 COQ4Q9Y3A0 265 aa18.31■□□□□ 0.52
CLTCL1-203ENST00000449918 TRIM49BA6NDI0 452 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 PRR5-ARHGAP8B1AHC4 643 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 K7EQS6 105 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 CYP26A1O43174 497 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 LRP3O75074 770 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 RPP40O75818 363 aaKnown RBP18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 APBB3O95704 486 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 APODP05090 189 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 PSEN1P49768 467 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 KIF11P52732 1056 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 RAD23BP54727 409 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 ARHGAP8P85298 464 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 DMC1Q14565 340 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 PUM1Q14671 1186 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 GAB4Q2WGN9 574 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 PREPLQ4J6C6 727 aaPredicted RBP18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 ISM2Q6H9L7 571 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 KLHDC10Q6PID8 442 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 GPRIN1Q7Z2K8 1008 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 CACNA2D4Q7Z3S7 1137 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 USP33Q8TEY7 942 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 TATDN2Q93075 761 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 CEP63Q96MT8 703 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 HHIPQ96QV1 700 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 UBXN6Q9BZV1 441 aa18.3■□□□□ 0.52
CLTCL1-203ENST00000449918 AXIN1O15169 862 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 TBX18O95935 607 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 CCDC192P0DO97 292 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 IRF1P10914 325 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 HOXC13P31276 330 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 SLC6A11P48066 632 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 PGFP49763 221 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 SEC13P55735 322 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 YWHAEP62258 255 aaKnown RBP18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 MRPS21P82921 87 aaKnown RBP18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 SPEM2Q0P670 501 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 C2orf27AQ580R0 203 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 LY6G5CQ5SRR4 150 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 HTR3DQ70Z44 454 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 CCDC186Q7Z3E2 898 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 BBS7Q8IWZ6 715 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 FAM160A2Q8N612 972 aaPredicted RBP18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 SLC4A11Q8NBS3 891 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 SLC35C1Q96A29 364 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 ARID3AQ99856 593 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 KLF16Q9BXK1 252 aaPredicted RBP18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 POLR3BQ9NW08 1133 aaPredicted RBP18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 EBF1Q9UH73 591 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 DNMT3LQ9UJW3 386 aa18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 LSM7Q9UK45 103 aaKnown RBP18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 CIZ1Q9ULV3 898 aaPredicted RBP18.29■□□□□ 0.52
CLTCL1-203ENST00000449918 HELZP42694 1942 aaKnown RBP18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 ZNF292O60281 2723 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 A0A0A0MRY4 1105 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 A0A1W2PQH9 124 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 BICDL2A1A5D9 508 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 HOXC11O43248 304 aaPredicted RBP18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 KAT7O95251 611 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 RALAP11233 206 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 RARGP13631 454 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 TGM1P22735 817 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 GRIA2P42262 883 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 PLA2G4AP47712 749 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 CUL2Q13617 745 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 RSPO4Q2I0M5 234 aaPredicted RBP18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 ARHGAP17Q68EM7 881 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 NUDT18Q6ZVK8 323 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 LOXL4Q96JB6 756 aa18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 CDK5RAP1Q96SZ6 601 aaKnown RBP18.28■□□□□ 0.52
CLTCL1-203ENST00000449918 ARHGEF4Q9NR80 690 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms