RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 PIDD1Q9HB75 910 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 IL21Q9HBE4 155 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 DMAP1Q9NPF5 467 aaPredicted RBP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 NCOR1O75376 2440 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 ITIH6Q6UXX5 1313 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 CTAGE15A4D2H0 777 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 A6NNZ2 444 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 MOSPD3O75425 235 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 HNRNPA1P09651 372 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 CTAGE8P0CG41 777 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 SRGAP2BP0DMP2 458 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 STAT1P42224 750 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 SLC5A3P53794 718 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 PTK2Q05397 1052 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 TBX2Q13207 712 aaPredicted RBP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 CBX2Q14781 532 aaPredicted RBP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 TUBB8Q3ZCM7 444 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 WDR93Q6P2C0 686 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 CTAGE6Q86UF2 777 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 CTAGE4Q8IX94 777 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 CMASQ8NFW8 434 aaPredicted RBP10.37□□□□□ -0.75
CCDC171-203ENST00000449575 ING5Q8WYH8 240 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 DPP7Q9UHL4 492 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 MAFFQ9ULX9 164 aa10.37□□□□□ -0.75
CCDC171-203ENST00000449575 RNF40O75150 1001 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 PLEKP08567 350 aaPredicted RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 MYL4P12829 197 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 GPD2P43304 727 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 ADKP55263 362 aaKnown RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 LEXMQ3ZCV2 418 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 C2CD6Q53TS8 623 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 FIGNQ5HY92 759 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 DENND5BQ6ZUT9 1274 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 DNAAF5Q86Y56 855 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 GIMAP7Q8NHV1 300 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 SLC35F5Q8WV83 523 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 C8orf48Q96LL4 319 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 ZNF512Q96ME7 567 aaPredicted RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 KIAA1257Q9ULG3 409 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 CAPN11Q9UMQ6 739 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 ATXN2Q99700 1313 aaKnown RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 HELZP42694 1942 aaKnown RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 A0A1W2PRU2 124 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 SHOX2O60902 331 aaPredicted RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 PTPN2P17706 415 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 RPL10AP62906 217 aaKnown RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 FMO1Q01740 532 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 ITIH3Q06033 890 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 PABPC1LQ4VXU2 614 aaKnown RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 PTCRAQ6ISU1 281 aaPredicted RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 CES5AQ6NT32 575 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 SPATS2Q86XZ4 545 aaKnown RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 CLEC4CQ8WTT0 213 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 PNKPQ96T60 521 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 PCDHB18PQ96TA0 734 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 WDR6Q9NNW5 1121 aaKnown RBP10.36□□□□□ -0.75
CCDC171-203ENST00000449575 THEGQ9P2T0 379 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 COG5Q9UP83 839 aa10.36□□□□□ -0.75
CCDC171-203ENST00000449575 CTAGE9A4FU28 777 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 XYLBO75191 536 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 CEBPBP17676 345 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 ANXA13P27216 316 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 GABRR2P28476 465 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 BCAT1P54687 386 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 CYP4F8P98187 520 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 BST2Q10589 180 aaKnown RBP10.35□□□□□ -0.75
CCDC171-203ENST00000449575 PRSS36Q5K4E3 855 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 ATAT1Q5SQI0 421 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 C1orf131Q8NDD1 294 aaKnown RBP10.35□□□□□ -0.75
CCDC171-203ENST00000449575 SHKBP1Q8TBC3 707 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 ZSWIM3Q96MP5 696 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 HESX1Q9UBX0 185 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 CHORDC1Q9UHD1 332 aaPredicted RBP10.35□□□□□ -0.75
CCDC171-203ENST00000449575 ATP8B3O60423 1300 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 NUP210Q8TEM1 1887 aaPredicted RBP10.35□□□□□ -0.75
CCDC171-203ENST00000449575 F11P03951 625 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 KRT9P35527 623 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 PDE6CP51160 858 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 TAF10Q12962 218 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 SMAD4Q13485 552 aaKnown RBP10.35□□□□□ -0.75
CCDC171-203ENST00000449575 VEPH1Q14D04 833 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 HGSNATQ68CP4 663 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 TOGARAM2Q6ZUX3 1019 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 GET4Q7L5D6 327 aaPredicted RBP10.35□□□□□ -0.75
CCDC171-203ENST00000449575 NUP93Q8N1F7 819 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 PIWIL1Q96J94 861 aaKnown RBP10.35□□□□□ -0.75
CCDC171-203ENST00000449575 SYT11Q9BT88 431 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 NUP58Q9BVL2 599 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 HAUS4Q9H6D7 363 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 AIPL1Q9NZN9 384 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 FAM169AQ9Y6X4 670 aa10.35□□□□□ -0.75
CCDC171-203ENST00000449575 MYOFQ9NZM1 2061 aa10.34□□□□□ -0.75
CCDC171-203ENST00000449575 CLUHO75153 1309 aa10.34□□□□□ -0.75
CCDC171-203ENST00000449575 A0A1W2PQJ5 194 aa10.34□□□□□ -0.75
CCDC171-203ENST00000449575 XPO1O14980 1071 aaKnown RBP10.34□□□□□ -0.75
CCDC171-203ENST00000449575 USP17L7P0C7H9 530 aa10.34□□□□□ -0.75
CCDC171-203ENST00000449575 CSH1P0DML2 217 aa10.34□□□□□ -0.75
CCDC171-203ENST00000449575 CSH2P0DML3 217 aa10.34□□□□□ -0.75
CCDC171-203ENST00000449575 LCP1P13796 627 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms