RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 PCGF5Q86SE9 256 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 C14orf80Q86SX3 495 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 C4orf33Q8N1A6 199 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 CGREF1Q99674 301 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 ANAPC7Q9UJX3 599 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 NEU2Q9Y3R4 380 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 TTLL13PA6NNM8 815 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 H3BSA7 217 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 XPOTO43592 962 aaKnown RBP13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 KCNA2P16389 499 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 PIK3CAP42336 1068 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 KRT72Q14CN4 511 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 CCNG2Q16589 344 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 FBXL19Q6PCT2 694 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 SYT11Q9BT88 431 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 TRIM55Q9BYV6 548 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 NRDE2Q9H7Z3 1164 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 PKD2L1Q9P0L9 805 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 IKBKGQ9Y6K9 419 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 PSTPIP1O43586 416 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 FGFR1P11362 822 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 CHRNB2P17787 502 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 ITGA8P53708 1063 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 ZNF423Q2M1K9 1284 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 TRABD2AQ86V40 505 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 ULK2Q8IYT8 1036 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 GDPD5Q8WTR4 605 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 MAML1Q92585 1016 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 CCT7Q99832 543 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 RAB20Q9NX57 234 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 RRN3Q9NYV6 651 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 SLC7A8Q9UHI5 535 aa13.99□□□□□ -0.17
SYNGAP1-204ENST00000449372 WDR91A4D1P6 747 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 PRPF4O43172 522 aaKnown RBP eCLIP13.98□□□□□ -0.173e-9■■■■■ 30.9
SYNGAP1-204ENST00000449372 ATMINO43313 823 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ZBED1O96006 694 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 YWHABP31946 246 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ENTPD1P49961 510 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ENPEPQ07075 957 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 CENPUQ71F23 418 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ICA1LQ8NDH6 482 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 PYDC1Q8WXC3 89 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 GPRASP2Q96D09 838 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 MRPS26Q9BYN8 205 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 GPR88Q9GZN0 384 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ARMCX1Q9P291 453 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 GCLMP48507 274 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 EIF2B2P49770 351 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 NCKAP1LP55160 1127 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 XIAPP98170 497 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 GTF2BQ00403 316 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 KRT81Q14533 505 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 CBWD6Q4V339 395 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 CBWD3Q5JTY5 395 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 CBWD5Q5RIA9 395 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 DEPDC1Q5TB30 811 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ADGRG6Q86SQ4 1221 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 NLRX1Q86UT6 975 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ZNF410Q86VK4 478 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 FAM71AQ8IYT1 594 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 LMO3Q8TAP4 145 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ATAD3AQ9NVI7 634 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ZNHIT2Q9UHR6 403 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 CTDP1Q9Y5B0 961 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 SNCAIPQ9Y6H5 919 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 TM7SF2O76062 418 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 PEX2P28328 305 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 PTP4A2Q12974 167 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 IZUMO3Q5VZ72 239 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ANO5Q75V66 913 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 TTC7BQ86TV6 843 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ERI1Q8IV48 349 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 RDM1Q8NG50 284 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 KRT35Q92764 455 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 ITPKCQ96DU7 683 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 KIAA1586Q9HCI6 787 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 TMEM8AQ9HCN3 771 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 S100A14Q9HCY8 104 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 PDLIM7Q9NR12 457 aa13.98□□□□□ -0.17
SYNGAP1-204ENST00000449372 TP73O15350 636 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 CLDN3O15551 220 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 NR3C2P08235 984 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 DLATP10515 647 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 PLS3P13797 630 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 SFNP31947 248 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 JAK3P52333 1124 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 MAPK6Q16659 721 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 SNRNP48Q6IEG0 339 aaKnown RBP13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 LVRNQ6Q4G3 990 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 RELL1Q8IUW5 271 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 PPP4R1Q8TF05 950 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 PWWP2AQ96N64 755 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 GBA3Q9H227 469 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 SLC24A2Q9UI40 661 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 GIT1Q9Y2X7 761 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 OCM2P0CE71 109 aa13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 OCMP0CE72 109 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-204ENST00000449372 CDH2P19022 906 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms