RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 FAM76AQ8TAV0 307 aa18.5■□□□□ 0.55
LMNA-208ENST00000448611 MYCBPAPQ8TBZ2 947 aa18.5■□□□□ 0.55
LMNA-208ENST00000448611 SPATA18Q8TC71 538 aa18.5■□□□□ 0.55
LMNA-208ENST00000448611 TMEM121Q9BTD3 319 aa18.5■□□□□ 0.55
LMNA-208ENST00000448611 SNRNP25Q9BV90 132 aaKnown RBP18.5■□□□□ 0.55
LMNA-208ENST00000448611 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.5■□□□□ 0.553e-8■■□□□ 12.4
LMNA-208ENST00000448611 ANAPC5Q9UJX4 755 aa18.5■□□□□ 0.55
LMNA-208ENST00000448611 TSC2P49815 1807 aa18.5■□□□□ 0.55
LMNA-208ENST00000448611 TDRD15B5MCY1 1934 aaKnown RBP18.5■□□□□ 0.55
LMNA-208ENST00000448611 EOMESO95936 686 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 ZSCAN5DPP0CG00 497 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 PAX3P23760 479 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 IL4RP24394 825 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 BRCC3P46736 316 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 CDR1P51861 262 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 IZUMO3Q5VZ72 239 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 VSIG1Q86XK7 387 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 SMOQ99835 787 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 ETS1P14921 441 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 PECAM1P16284 738 aaPredicted RBP18.49■□□□□ 0.55
LMNA-208ENST00000448611 PCSK1P29120 753 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 CHKAP35790 457 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 MATKP42679 507 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 EIF3BP55884 814 aaKnown RBP18.49■□□□□ 0.55
LMNA-208ENST00000448611 MAP3K7CLP57077 242 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 FAM189BP81408 668 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 MRPS5P82675 430 aaKnown RBP18.49■□□□□ 0.55
LMNA-208ENST00000448611 CA9Q16790 459 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 P3H1Q32P28 736 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 ZC3H12AQ5D1E8 599 aaKnown RBP18.49■□□□□ 0.55
LMNA-208ENST00000448611 UBAP2Q5T6F2 1119 aaKnown RBP18.49■□□□□ 0.55
LMNA-208ENST00000448611 KCTD16Q68DU8 428 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 HIBCHQ6NVY1 386 aaPredicted RBP18.49■□□□□ 0.55
LMNA-208ENST00000448611 MAP7D3Q8IWC1 876 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 NDRG1Q92597 394 aaKnown RBP18.49■□□□□ 0.55
LMNA-208ENST00000448611 ATP6V1G3Q96LB4 118 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 RNF157Q96PX1 679 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.49■□□□□ 0.55
LMNA-208ENST00000448611 ADAM7Q9H2U9 754 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 LRRC4Q9HBW1 653 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 PCDH18Q9HCL0 1135 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 GPATCH2LQ9NWQ4 482 aa18.49■□□□□ 0.55
LMNA-208ENST00000448611 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.49■□□□□ 0.55
LMNA-208ENST00000448611 KBTBD13C9JR72 458 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 DAB1O75553 588 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 MYZAPP0CAP1 466 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 NDUFV1P49821 464 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 CDK7P50613 346 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 ATXN1P54253 815 aaKnown RBP18.48■□□□□ 0.55
LMNA-208ENST00000448611 KRT81Q14533 505 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 DENND2CQ68D51 928 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 STRADAQ7RTN6 431 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 ZMIZ2Q8NF64 920 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 HASPINQ8TF76 798 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 RSPH1Q8WYR4 309 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 ACBD6Q9BR61 282 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 MAK16Q9BXY0 300 aaKnown RBP18.48■□□□□ 0.55
LMNA-208ENST00000448611 TSPYL1Q9H0U9 437 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 PCDH9Q9HC56 1237 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 TMEM30AQ9NV96 361 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 CALCOCO1Q9P1Z2 691 aa18.48■□□□□ 0.55
LMNA-208ENST00000448611 GOLGA6L10A6NI86 522 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 RIPK2O43353 540 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 AP1G2O75843 785 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 SHBGP04278 402 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 ITGB1P05556 798 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 TKTL1P51854 596 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 CACNA2D1P54289 1103 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 YWHAZP63104 245 aaKnown RBP18.47■□□□□ 0.55
LMNA-208ENST00000448611 TFDP2Q14188 446 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 SLC29A2Q14542 456 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 MTFR1Q15390 333 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 DCLRE1AQ6PJP8 1040 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 CCDC25Q86WR0 208 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 METTL23Q86XA0 190 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 DEFB106AQ8N104 65 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 SH2D3CQ8N5H7 860 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 LRRC4CQ9HCJ2 640 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 DSEQ9UL01 958 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 HMGB1P1B2RPK0 211 aaPredicted RBP18.47■□□□□ 0.55
LMNA-208ENST00000448611 SGK1O00141 431 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 DNALI1O14645 258 aaPredicted RBP18.47■□□□□ 0.55
LMNA-208ENST00000448611 B4GALT3O60512 393 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 NOMO1Q15155 1222 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 SLC25A52Q3SY17 297 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 RAB41Q5JT25 222 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 CLLU1OSQ5K130 101 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 ERMARDQ5T6L9 678 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 FAM171BQ6P995 826 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 GLB1LQ6UWU2 654 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 TRMT10CQ7L0Y3 403 aaKnown RBP18.47■□□□□ 0.55
LMNA-208ENST00000448611 LRRC8DQ7L1W4 858 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 BNIPLQ7Z465 357 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 SIX6OS1Q8N1H7 587 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 PQLC3Q8N755 202 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 NT5C3BQ969T7 300 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 FAM149B1Q96BN6 582 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 FAF2Q96CS3 445 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 SUSD3Q96L08 255 aa18.47■□□□□ 0.55
LMNA-208ENST00000448611 KCNK16Q96T55 309 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms