RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 DRC3Q9H069 523 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SIRPGQ9P1W8 387 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 PPP1R1BQ9UD71 204 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SNCAIPQ9Y6H5 919 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SQORQ9Y6N5 450 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SLIT2O94813 1529 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 ASTN2O75129 1339 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 CYP3A7-CYP3A51PA0A087WV96 503 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SIN3BO75182 1162 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 TOM1L1O75674 476 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 NCF2P19878 526 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 CYP3A7P24462 503 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 CA8P35219 290 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 PARP10Q53GL7 1025 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 RC3H1Q5TC82 1133 aaKnown RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 CYB5RLQ6IPT4 315 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 C1orf186Q6ZWK4 172 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 MIER3Q7Z3K6 550 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SLC9A9Q8IVB4 645 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 XAB2Q9HCS7 855 aaKnown RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SEL1LQ9UBV2 794 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 NHSL1Q5SYE7 1610 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 COL18A1P39060 1754 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SNED1Q8TER0 1413 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 UBE4BO95155 1302 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 USP17L10C9JJH3 530 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 ZBTB39O15060 712 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 ZBTB5O15062 677 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 FBXO21O94952 628 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 LDHAP00338 332 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 KRT1P04264 644 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 WEE2P0C1S8 567 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 NELFEP18615 380 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 NSFP46459 744 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 ESRRGP62508 458 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 INAQ16352 499 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TEX44Q53QW1 395 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 RWDD4Q6NW29 188 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 MFSD7Q6UXD7 560 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 RSPH3Q86UC2 560 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TRPC4APQ8TEL6 797 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 DDX1Q92499 740 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 CPT1BQ92523 772 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 HSPH1Q92598 858 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TRIM11Q96F44 468 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 SLC4A9Q96Q91 983 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 WRNIP1Q96S55 665 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 RANBP9Q96S59 729 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 WDR83Q9BRX9 315 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TRPV5Q9NQA5 729 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 XPNPEP1Q9NQW7 623 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 ARHGAP26Q9UNA1 814 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 FARP1Q9Y4F1 1045 aaPredicted RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TISP43B9A030 160 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 MCF2LO15068 1137 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TTC39BQ5VTQ0 682 aaPredicted RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 RCOR2Q8IZ40 523 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 SLC7A5P1Q8MH63 180 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 ELMO3Q96BJ8 720 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 HOMER2Q9NSB8 354 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 THAP1Q9NVV9 213 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 EBF1Q9UH73 591 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 SCINQ9Y6U3 715 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TCRBV9S1A1TA0A576 114 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 FAM155BO75949 473 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 KRT37O76014 449 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 H6PDO95479 791 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 PRDX6P30041 224 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 CREB5Q02930 508 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 CLPPQ16740 277 aaPredicted RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 KRT80Q6KB66 452 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 NIPAL1Q6NVV3 410 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 FRMD7Q6ZUT3 714 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 GPR141Q7Z602 305 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 PPM1NQ8N819 430 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 PIWIL2Q8TC59 973 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 ATP6V0A1Q93050 837 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 FIZ1Q96SL8 496 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 GCOM2Q9BZD3 368 aaPredicted RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 EXOC7Q9UPT5 735 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 DNAJC16Q9Y2G8 782 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 PSMD12O00232 456 aaPredicted RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TBX3O15119 743 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 CNOT3O75175 753 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 ADRA2BP18089 450 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 ACAT1P24752 427 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 DEPDC1Q5TB30 811 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 LIN9Q5TKA1 542 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TPTE2Q6XPS3 522 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 GRIN3AQ8TCU5 1115 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 MBOAT7Q96N66 472 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 C10orf88Q9H8K7 445 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 EPS15L1Q9UBC2 864 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 XPO7Q9UIA9 1087 aaKnown RBP9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 MYRFQ9Y2G1 1151 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 GIT1Q9Y2X7 761 aa9.76□□□□□ -0.85
SYNPO2-204ENST00000448416 TAF1LQ8IZX4 1826 aa9.75□□□□□ -0.85
SYNPO2-204ENST00000448416 BAIAP3O94812 1187 aa9.75□□□□□ -0.85
SYNPO2-204ENST00000448416 SNRPAP09012 282 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms