RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 ASPAP45381 313 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 MAP3K7CLP57077 242 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 MRPS21P82921 87 aaKnown RBP29.95■■■□□ 2.39
CBX4-202ENST00000448310 CRY1Q16526 586 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 STPG1Q5TH74 334 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 SNX30Q5VWJ9 437 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 TXNDC5Q8NBS9 432 aaKnown RBP29.95■■■□□ 2.39
CBX4-202ENST00000448310 MDGA1Q8NFP4 955 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 ARHGEF4Q9NR80 690 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 FRMD4BQ9Y2L6 1034 aa29.95■■■□□ 2.39
CBX4-202ENST00000448310 FAM92AA1XBS5 289 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 KLF8O95600 359 aaPredicted RBP29.94■■■□□ 2.38
CBX4-202ENST00000448310 ASS1P00966 412 aaKnown RBP29.94■■■□□ 2.38
CBX4-202ENST00000448310 ZDHHC11BP0C7U3 371 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 BCKDHBP21953 392 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 EIF2DP41214 584 aaKnown RBP29.94■■■□□ 2.38
CBX4-202ENST00000448310 USP39Q53GS9 565 aaKnown RBP29.94■■■□□ 2.38
CBX4-202ENST00000448310 BBS7Q8IWZ6 715 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 CRYBG2Q8N1P7 616 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 NAT16Q8N8M0 369 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 IL17RCQ8NAC3 791 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 CNOT6LQ96LI5 555 aaKnown RBP29.94■■■□□ 2.38
CBX4-202ENST00000448310 ZDHHC9Q9Y397 364 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 LAMA1P25391 3075 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 CACNA1BQ00975 2339 aa29.94■■■□□ 2.38
CBX4-202ENST00000448310 SGK1O00141 431 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 CALUO43852 315 aaPredicted RBP29.93■■■□□ 2.38
CBX4-202ENST00000448310 ADORA2BP29275 332 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 SYKP43405 635 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 TAF4BQ92750 862 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 JAKMIP2Q96AA8 810 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 TWNKQ96RR1 684 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 NACA2Q9H009 215 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 COMMD8Q9NX08 183 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 MAPK8IP1Q9UQF2 711 aa29.93■■■□□ 2.38
CBX4-202ENST00000448310 CHD8Q9HCK8 2581 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 BCLAF3A2AJT9 711 aaKnown RBP29.92■■■□□ 2.38
CBX4-202ENST00000448310 TM4SF5O14894 197 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 CAVIN2O95810 425 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 MYL1P05976 194 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 TRIM49P0CI25 452 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 TRIM49CP0CI26 452 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 TUBP50607 506 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 VAMP7P51809 220 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 NDUFA8P51970 172 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 GAD2Q05329 585 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 PMS2CLQ68D20 193 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 UNC93AQ86WB7 457 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 DDX1Q92499 740 aaKnown RBP29.92■■■□□ 2.38
CBX4-202ENST00000448310 CSNK1G1Q9HCP0 422 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 TRAF3IP3Q9Y228 551 aa29.92■■■□□ 2.38
CBX4-202ENST00000448310 IKBKBO14920 756 aa29.91■■■□□ 2.38
CBX4-202ENST00000448310 GRIA2P42262 883 aa29.91■■■□□ 2.38
CBX4-202ENST00000448310 KIR2DL1P43626 348 aaPredicted RBP29.91■■■□□ 2.38
CBX4-202ENST00000448310 KRT85P78386 507 aa29.91■■■□□ 2.38
CBX4-202ENST00000448310 GPRIN1Q7Z2K8 1008 aa29.91■■■□□ 2.38
CBX4-202ENST00000448310 PHTF2Q8N3S3 785 aa29.91■■■□□ 2.38
CBX4-202ENST00000448310 OTUB2Q96DC9 234 aa29.91■■■□□ 2.38
CBX4-202ENST00000448310 PALM2-AKAP2B1ALY0 433 aaPredicted RBP29.9■■■□□ 2.38
CBX4-202ENST00000448310 TLR5O60602 858 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 TBX18O95935 607 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 NR2F2P24468 414 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 GCLMP48507 274 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 RNF43Q68DV7 783 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 TMEM25Q86YD3 366 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 ETFBKMTQ8IXQ9 262 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 RLN3Q8WXF3 142 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 MMRN2Q9H8L6 949 aa29.9■■■□□ 2.38
CBX4-202ENST00000448310 APOBEC3GQ9HC16 384 aaKnown RBP29.9■■■□□ 2.38
CBX4-202ENST00000448310 CIZ1Q9ULV3 898 aaPredicted RBP29.9■■■□□ 2.38
CBX4-202ENST00000448310 MAP1BP46821 2468 aaKnown RBP29.89■■■□□ 2.38
CBX4-202ENST00000448310 A0A0A0MRY4 1105 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 RHOBTB3O94955 611 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 FAM200BP0CF97 657 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 PPP3CAQ08209 521 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 ANO4Q32M45 955 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 TAS1R2Q8TE23 839 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 EDEM2Q9BV94 578 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 FBXO44Q9H4M3 255 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 TLR8Q9NR97 1041 aaKnown RBP29.89■■■□□ 2.38
CBX4-202ENST00000448310 SPHK2Q9NRA0 654 aa29.89■■■□□ 2.38
CBX4-202ENST00000448310 TRIM24O15164 1050 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 HOXC11O43248 304 aaPredicted RBP29.88■■■□□ 2.37
CBX4-202ENST00000448310 ADAM23O75077 832 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 TULP3O75386 442 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 ALDH1A2O94788 518 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 TNFRSF4P43489 277 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 DPYDQ12882 1025 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 EOGTQ5NDL2 527 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 BTBD8Q5XKL5 378 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 CLEC20AQ6ZU45 233 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 C11orf74Q86VG3 221 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 OLIG1Q8TAK6 271 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 CCDC47Q96A33 483 aaKnown RBP29.88■■■□□ 2.37
CBX4-202ENST00000448310 OSER1Q9NX31 292 aa29.88■■■□□ 2.37
CBX4-202ENST00000448310 FAM237AA0A1B0GTK4 181 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 TBC1D3BA6NDS4 549 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 HHLA1C9JL84 531 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 MAPK13O15264 365 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 CYP26A1O43174 497 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms