RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TRIM68Q6AZZ1 485 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 PMF1Q6P1K2 205 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 TPRG1Q6ZUI0 275 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 CCDC186Q7Z3E2 898 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 SLC47A2Q86VL8 602 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 NEK11Q8NG66 645 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 CSGALNACT1Q8TDX6 532 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 ZNF606Q8WXB4 792 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 IRF7Q92985 503 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 NAA15Q9BXJ9 866 aaKnown RBP12.54□□□□□ -0.4
RFC4-208ENST00000447345 PLCB1Q9NQ66 1216 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 ST7Q9NRC1 585 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 OBP2AQ9NY56 170 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 WNT16Q9UBV4 365 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 WNT6Q9Y6F9 365 aa12.54□□□□□ -0.4
RFC4-208ENST00000447345 ATG2BQ96BY7 2078 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 SOBPA7XYQ1 873 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 PRR33A8MZF0 331 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 LEFTY2O00292 366 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 CHADO15335 359 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 GFPT2O94808 682 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 TBX18O95935 607 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 ZBED1O96006 694 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 RARGP13631 454 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 CLCN1P35523 988 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 SOX9P48436 509 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 ZXDBP98169 803 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 PTK2Q05397 1052 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 TNK2Q07912 1038 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 ZNF268Q14587 947 aaPredicted RBP12.53□□□□□ -0.4
RFC4-208ENST00000447345 FILIP1LQ4L180 1135 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 ARHGAP29Q52LW3 1261 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 RAB41Q5JT25 222 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 TAF3Q5VWG9 929 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 CC2D1AQ6P1N0 951 aaPredicted RBP12.53□□□□□ -0.4
RFC4-208ENST00000447345 SCD5Q86SK9 330 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 SUGP1Q8IWZ8 645 aaKnown RBP12.53□□□□□ -0.4
RFC4-208ENST00000447345 FAM71AQ8IYT1 594 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 CLEC4CQ8WTT0 213 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 DNASE1L2Q92874 299 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 SPAG5Q96R06 1193 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 STK33Q9BYT3 514 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 UBXN6Q9BZV1 441 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 FOXQ1Q9C009 403 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 MIS12Q9H081 205 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 TSPY26PQ9H489 355 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 EBF3Q9H4W6 596 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 TBC1D17Q9HA65 648 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
RFC4-208ENST00000447345 GTSE1Q9NYZ3 720 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 CFAP97Q9P2B7 532 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 RASAL2Q9UJF2 1139 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 USP3Q9Y6I4 520 aa12.53□□□□□ -0.4
RFC4-208ENST00000447345 LRRC10BA6NIK2 292 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 ARNTLO00327 626 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 GABBR2O75899 941 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 ARSAP15289 507 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 PFKLP17858 780 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 CD72P21854 359 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 GPD2P43304 727 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 IFNAR2P48551 515 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 TUBP50607 506 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 YWHAGP61981 247 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFC4-208ENST00000447345 SLC7A9P82251 487 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 SLC44A4Q53GD3 710 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 C10orf120Q5SQS8 335 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 SNX30Q5VWJ9 437 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 CWF19L1Q69YN2 538 aaKnown RBP12.52□□□□□ -0.41
RFC4-208ENST00000447345 LRSAM1Q6UWE0 723 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 RSRC2Q7L4I2 434 aaKnown RBP12.52□□□□□ -0.41
RFC4-208ENST00000447345 MIB1Q86YT6 1006 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 FBXL6Q8N531 539 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 RNF214Q8ND24 703 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
RFC4-208ENST00000447345 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 KCTD13Q8WZ19 329 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 NAP1L5Q96NT1 182 aaPredicted RBP12.52□□□□□ -0.41
RFC4-208ENST00000447345 ERGIC2Q96RQ1 377 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
RFC4-208ENST00000447345 CYLDQ9NQC7 956 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 GKN1Q9NS71 199 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
RFC4-208ENST00000447345 CYTH4Q9UIA0 394 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 PIAS3Q9Y6X2 628 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 F5P12259 2224 aa12.52□□□□□ -0.41
RFC4-208ENST00000447345 A0A1B0GTH6 734 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 YJEFN3A6XGL0 299 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 E7ENQ6 273 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 CAVIN2O95810 425 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 RALAP11233 206 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 CYP11B1P15538 503 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 KRT9P35527 623 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 ATP5C1P36542 298 aaKnown RBP12.51□□□□□ -0.41
RFC4-208ENST00000447345 PSEN1P49768 467 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 KPNA1P52294 538 aaPredicted RBP12.51□□□□□ -0.41
RFC4-208ENST00000447345 VCPP55072 806 aaKnown RBP12.51□□□□□ -0.41
RFC4-208ENST00000447345 DAOAP59103 153 aa12.51□□□□□ -0.41
RFC4-208ENST00000447345 FANCCQ00597 558 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms