RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 PGFP49763 221 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 VAV2P52735 878 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 YWHAGP61981 247 aaKnown RBP eCLIP18.26■□□□□ 0.51
SGCE-206ENST00000445866 YWHAZP63104 245 aaKnown RBP18.26■□□□□ 0.51
SGCE-206ENST00000445866 SKIV2LQ15477 1246 aaKnown RBP18.26■□□□□ 0.51
SGCE-206ENST00000445866 BSPRYQ5W0U4 402 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 PLEKHA7Q6IQ23 1121 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 SYCE2Q6PIF2 218 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 ARHGAP18Q8N392 663 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 C3orf20Q8ND61 904 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 PABPC5Q96DU9 382 aaKnown RBP18.26■□□□□ 0.51
SGCE-206ENST00000445866 PIWIL1Q96J94 861 aaKnown RBP18.26■□□□□ 0.51
SGCE-206ENST00000445866 MRPL47Q9HD33 250 aaKnown RBP18.26■□□□□ 0.51
SGCE-206ENST00000445866 AVENQ9NQS1 362 aaPredicted RBP18.26■□□□□ 0.51
SGCE-206ENST00000445866 TLR8Q9NR97 1041 aaKnown RBP18.26■□□□□ 0.51
SGCE-206ENST00000445866 CLEC1BQ9P126 229 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 PYCARDQ9ULZ3 195 aa18.26■□□□□ 0.51
SGCE-206ENST00000445866 GJB6O95452 261 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 RHOP08100 348 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 GLI1P08151 1106 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 POU2F2P09086 479 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 DLX2Q07687 328 aaPredicted RBP18.25■□□□□ 0.51
SGCE-206ENST00000445866 KIF5AQ12840 1032 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 HS1BP3Q53T59 392 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 DCUN1D2Q6PH85 259 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 HFE2Q6ZVN8 426 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 SCD5Q86SK9 330 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 FEZF2Q8TBJ5 459 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 KHSRPQ92945 711 aaKnown RBP eCLIP18.25■□□□□ 0.513e-6■■■■□ 25.3
SGCE-206ENST00000445866 LACRTQ9GZZ8 138 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 CTTNBP2NLQ9P2B4 639 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 PPP2R2CQ9Y2T4 447 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 SCINQ9Y6U3 715 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 SZT2Q5T011 3432 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 PLXNA4Q9HCM2 1894 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 LTFP02788 710 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 F11P03951 625 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 GABRR2P28476 465 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 DEKP35659 375 aaKnown RBP18.25■□□□□ 0.51
SGCE-206ENST00000445866 PPP3CCP48454 512 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 BTBD8Q5XKL5 378 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 PDZD4Q76G19 769 aaPredicted RBP18.25■□□□□ 0.51
SGCE-206ENST00000445866 SLC26A9Q7LBE3 791 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 BHLHA9Q7RTU4 235 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 GPR149Q86SP6 731 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 PDZD8Q8NEN9 1154 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 SLC35G2Q8TBE7 412 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 OVCA2Q8WZ82 227 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 EDEM1Q92611 657 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 LRRC3Q9BY71 257 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 ATXN3LQ9H3M9 355 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 NMUR1Q9HB89 426 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 METTL5Q9NRN9 209 aaKnown RBP18.25■□□□□ 0.51
SGCE-206ENST00000445866 DUSP10Q9Y6W6 482 aa18.25■□□□□ 0.51
SGCE-206ENST00000445866 GBF1Q92538 1859 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 ZNF840PA6NDX5 716 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 CAPN9O14815 690 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 HSF2BPO75031 334 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 RFC1P35251 1148 aaPredicted RBP18.24■□□□□ 0.51
SGCE-206ENST00000445866 LTBRP36941 435 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 SCNN1AP37088 669 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 NOP2P46087 812 aaKnown RBP18.24■□□□□ 0.51
SGCE-206ENST00000445866 PSEN1P49768 467 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 GSCP56915 257 aaPredicted RBP18.24■□□□□ 0.51
SGCE-206ENST00000445866 NTHL1P78549 312 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 ATAT1Q5SQI0 421 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 CES5AQ6NT32 575 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 GAREM2Q75VX8 874 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 TMC8Q8IU68 726 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 GCNAQ96QF7 691 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 NUP85Q9BW27 656 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 ADAM7Q9H2U9 754 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 IL21Q9HBE4 155 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 POPDC2Q9HBU9 364 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 ABCC13Q9NSE7 274 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 ASNSD1Q9NWL6 643 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 TMEM59LQ9UK28 342 aa18.24■□□□□ 0.51
SGCE-206ENST00000445866 A0A0U1RQJ8 604 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 TCRBV5S1A1TA0A578 114 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 ZSCAN12O43309 604 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 PAPLNO95428 1278 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 FGF19O95750 216 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 ZDHHC11BP0C7U3 371 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 RALAP11233 206 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 NCAM1P13591 858 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 PDGFRAP16234 1089 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 CDC25CP30307 473 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 RPL7AP62424 266 aaKnown RBP18.23■□□□□ 0.51
SGCE-206ENST00000445866 COL19A1Q14993 1142 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 DCAF6Q58WW2 860 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 DEFB106AQ8N104 65 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 EMC1Q8N766 993 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 LEMD2Q8NC56 503 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 RNF139Q8WU17 664 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 ATRIPQ8WXE1 791 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 MCEEQ96PE7 176 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 TRIM62Q9BVG3 475 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 S1PR5Q9H228 398 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 OSER1Q9NX31 292 aa18.23■□□□□ 0.51
SGCE-206ENST00000445866 TRMT1Q9NXH9 659 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms