RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MTF1Q14872 753 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 CYP4A22Q5TCH4 519 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 MMS22LQ6ZRQ5 1243 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 DENND5BQ6ZUT9 1274 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 GET4Q7L5D6 327 aaPredicted RBP18.11■□□□□ 0.49
LIME1-202ENST00000444951 ERICH1Q86X53 443 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 TMTC1Q8IUR5 882 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 SIX5Q8N196 739 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 NUP93Q8N1F7 819 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 SIX6OS1Q8N1H7 587 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 SPATA17Q96L03 361 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 ZNF512Q96ME7 567 aaPredicted RBP18.11■□□□□ 0.49
LIME1-202ENST00000444951 CPXM1Q96SM3 734 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 PRKD2Q9BZL6 878 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 PIDD1Q9HB75 910 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 ZDHHC7Q9NXF8 308 aa18.11■□□□□ 0.49
LIME1-202ENST00000444951 SSU72P8A0A1W2PR75 194 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 KRBA1A5PL33 1030 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 E5RJQ4 531 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 UNGP13051 313 aaPredicted RBP18.1■□□□□ 0.49
LIME1-202ENST00000444951 NTHL1P78549 312 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 PTPN20Q4JDL3 420 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 CCDC122Q5T0U0 273 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 ACAD10Q6JQN1 1059 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 ASCL5Q7RTU5 278 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 DNAJB7Q7Z6W7 309 aaPredicted RBP18.1■□□□□ 0.49
LIME1-202ENST00000444951 ITIH5Q86UX2 942 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 LRRC8AQ8IWT6 810 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 HS6ST3Q8IZP7 471 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 IPO4Q8TEX9 1081 aaKnown RBP18.1■□□□□ 0.49
LIME1-202ENST00000444951 NDRG1Q92597 394 aaKnown RBP18.1■□□□□ 0.49
LIME1-202ENST00000444951 CORO1BQ9BR76 489 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 C11orf70Q9BRQ4 267 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 HCFC1R1Q9NWW0 138 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 IGSF9Q9P2J2 1179 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 FBXL21Q9UKT6 434 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 RIF1Q5UIP0 2472 aaKnown RBP18.1■□□□□ 0.49
LIME1-202ENST00000444951 PTPRZ1P23471 2315 aaPredicted RBP18.1■□□□□ 0.49
LIME1-202ENST00000444951 NOTCH4Q99466 2003 aa18.1■□□□□ 0.49
LIME1-202ENST00000444951 TNFRSF10BO14763 440 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 XYLBO75191 536 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 GABBR2O75899 941 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 FTLP02792 175 aaPredicted RBP18.09■□□□□ 0.49
LIME1-202ENST00000444951 ERBB2P04626 1255 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 HNRNPA1P09651 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
LIME1-202ENST00000444951 USP17L7P0C7H9 530 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 CSH1P0DML2 217 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 CSH2P0DML3 217 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 AOC1P19801 751 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 YWHAQP27348 245 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 CDH5P33151 784 aaPredicted RBP18.09■□□□□ 0.49
LIME1-202ENST00000444951 CYLC1P35663 651 aaPredicted RBP18.09■□□□□ 0.49
LIME1-202ENST00000444951 OR6B2Q6IFH4 312 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 ALKBH5Q6P6C2 394 aaKnown RBP18.09■□□□□ 0.49
LIME1-202ENST00000444951 TMEM139Q8IV31 216 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 SCUBE3Q8IX30 993 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 SLC44A3Q8N4M1 653 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 MSANTD4Q8NCY6 345 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 CLEC4CQ8WTT0 213 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 STK32AQ8WU08 396 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 KCTD13Q8WZ19 329 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 PSMG2Q969U7 264 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 HSFY1Q96LI6 401 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 ZNF830Q96NB3 372 aaPredicted RBP18.09■□□□□ 0.49
LIME1-202ENST00000444951 SLC4A5Q9BY07 1137 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 ULBP1Q9BZM6 244 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 UBXN6Q9BZV1 441 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 ADAM22Q9P0K1 906 aa18.09■□□□□ 0.49
LIME1-202ENST00000444951 GOLGA8SH3BPF8 625 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 RTN2O75298 545 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 RTN3O95197 1032 aaPredicted RBP18.08■□□□□ 0.48
LIME1-202ENST00000444951 MYL4P12829 197 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 FECHP22830 423 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 ACADSBP45954 432 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 CENPCQ03188 943 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 SLC18A3Q16572 532 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 ASTE1Q2TB18 679 aaPredicted RBP18.08■□□□□ 0.48
LIME1-202ENST00000444951 RAD9BQ6WBX8 426 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 RTL10Q7L3V2 364 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 GRASPQ7Z6J2 395 aaPredicted RBP18.08■□□□□ 0.48
LIME1-202ENST00000444951 FBXO32Q969P5 355 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 PPP1R9BQ96SB3 815 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 ZNF334Q9HCZ1 680 aaPredicted RBP18.08■□□□□ 0.48
LIME1-202ENST00000444951 PNPLA8Q9NP80 782 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 NAGPAQ9UK23 515 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 CA14Q9ULX7 337 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 ASB3Q9Y575 518 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 COL4A3Q01955 1670 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 FAM186AA6NE01 2351 aa18.08■□□□□ 0.48
LIME1-202ENST00000444951 PATJQ8NI35 1801 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 PROB1E7EW31 1015 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 NRDCO43847 1150 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 ZBED1O96006 694 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 ABL1P00519 1130 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 LAMP2P13473 410 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 HMGA1P17096 107 aaKnown RBP18.07■□□□□ 0.48
LIME1-202ENST00000444951 PTPN2P17706 415 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 ABCB4P21439 1286 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 HOXA9P31269 272 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 SNX16P57768 344 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms