RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 ARMCX1Q9P291 453 aa8.28□□□□□ -1.08
RIF1-205ENST00000444746 LINC00854A0A1B0GVQ3 168 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 SPRP35270 261 aaPredicted RBP8.27□□□□□ -1.08
RIF1-205ENST00000444746 RGS2P41220 211 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 GSSP48637 474 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 SCNN1GP51170 649 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 AQP5P55064 265 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 RAD51Q06609 339 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 CCDC81Q6ZN84 652 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 TPGS1Q6ZTW0 290 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 PALB2Q86YC2 1186 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 CLEC4FQ8N1N0 589 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 TMEM120AQ9BXJ8 343 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 CATSPERBQ9H7T0 1116 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 SPATS2LQ9NUQ6 558 aaKnown RBP8.27□□□□□ -1.08
RIF1-205ENST00000444746 DEPDC5O75140 1603 aa8.27□□□□□ -1.08
RIF1-205ENST00000444746 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 CCDC22O60826 627 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ZNF177Q13360 481 aaPredicted RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 TBCCQ15814 346 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ACBD5Q5T8D3 534 aaPredicted RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 C16orf87Q6PH81 154 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 BTNL9Q6UXG8 535 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ZC3H13Q5T200 1668 aaKnown RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 MEIS2O14770 477 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ALDH1A1P00352 501 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ZCCHC18P0CG32 403 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 RPS12P25398 132 aaKnown RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 ELK3P41970 407 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 STKLD1Q8NE28 680 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ACTL9Q8TC94 416 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 MTMR9Q96QG7 549 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 LPIN3Q9BQK8 851 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 CIPCQ9C0C6 399 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 GOLGA2P5Q9HBQ8 144 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 EML4Q9HC35 981 aaKnown RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 NAALADL1Q9UQQ1 740 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 RIPK3Q9Y572 518 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ADGRB1O14514 1584 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 CCT8L1PA6NM43 557 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 HMGCRP04035 888 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 PECAM1P16284 738 aaPredicted RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 CHKAP35790 457 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 AGBL2Q5U5Z8 902 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 CXCL17Q6UXB2 119 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 RNF180Q86T96 592 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 OR5B17Q8NGF7 314 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 BRD8Q9H0E9 1235 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 BPIFA1Q9NP55 256 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 STOML1Q9UBI4 398 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 CACNG4Q9UBN1 327 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 SHOC2Q9UQ13 582 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 SLC27A5Q9Y2P5 690 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 STX7O15400 261 aaKnown RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 HOXA7P31268 230 aaPredicted RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 MLH1P40692 756 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ABRAQ8N0Z2 381 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 PRCCQ92733 491 aaPredicted RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 STARD7Q9NQZ5 370 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 SNX5Q9Y5X3 404 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 BCL9O00512 1426 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 THP07101 528 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 RBL1P28749 1068 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 HNRNPH1P31943 449 aaKnown RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 GTF2H3Q13889 308 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 PTK2BQ14289 1009 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 DMC1Q14565 340 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 METTL7BQ6UX53 244 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 TLK2Q86UE8 772 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 SCUBE2Q9NQ36 999 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 TMEM161AQ9NX61 479 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 NINJ2Q9NZG7 142 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 RNF112Q9ULX5 631 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ZMPSTE24O75844 475 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 CKMP06732 381 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 PCSK1P29120 753 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 ZC3H12AQ5D1E8 599 aaKnown RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 FAM171A1Q5VUB5 890 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 PAPD7Q5XG87 772 aaKnown RBP8.27□□□□□ -1.09
RIF1-205ENST00000444746 NLRP9Q7RTR0 991 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 OTOAQ7RTW8 1153 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 C12orf29Q8N999 325 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 TUBGCP3Q96CW5 907 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 MTBPQ96DY7 904 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 AGXT2Q9BYV1 514 aa8.27□□□□□ -1.09
RIF1-205ENST00000444746 KIAA0391O15091 583 aaKnown RBP8.26□□□□□ -1.09
RIF1-205ENST00000444746 MIIPQ5JXC2 388 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 DOK6Q6PKX4 331 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 REPS2Q8NFH8 660 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 NAF1Q96HR8 494 aaKnown RBP8.26□□□□□ -1.09
RIF1-205ENST00000444746 GAD1Q99259 594 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 CENPKQ9BS16 269 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 WWOXQ9NZC7 414 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 VPS28Q9UK41 221 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 OPLAHO14841 1288 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 MYO1DO94832 1006 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 CENPAP49450 140 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 KYAT1Q16773 422 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 ZNF484Q5JVG2 852 aa8.26□□□□□ -1.09
RIF1-205ENST00000444746 SYDE1Q6ZW31 735 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms