RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 TRMT61BQ9BVS5 477 aaKnown RBP14.81□□□□□ -0.04
SSBP3-208ENST00000444533 CLIC5Q9NZA1 410 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 BZW2Q9Y6E2 419 aaKnown RBP14.81□□□□□ -0.04
SSBP3-208ENST00000444533 UNC80Q8N2C7 3258 aa14.81□□□□□ -0.04
SSBP3-208ENST00000444533 A0A1W2PQH9 124 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 C2orf78A6NCI8 922 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 HEPACAM2A8MVW5 462 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 TNFRSF10AO00220 468 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 TULP2O00295 520 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 CAPN9O14815 690 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 TADA3O75528 432 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 ASGR2P07307 311 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 MMEP08473 750 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 RARGP13631 454 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 PSMC3P17980 439 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 TNFAIP3P21580 790 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 PBX1P40424 430 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 PFKPQ01813 784 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 KLHL30Q0D2K2 578 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 ZNF268Q14587 947 aaPredicted RBP14.8□□□□□ -0.04
SSBP3-208ENST00000444533 PM20D1Q6GTS8 502 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 TOGARAM2Q6ZUX3 1019 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 ERICH1Q86X53 443 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 ZDHHC17Q8IUH5 632 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 C1orf131Q8NDD1 294 aaKnown RBP14.8□□□□□ -0.04
SSBP3-208ENST00000444533 BPIFB1Q8TDL5 484 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 FGF14Q92915 247 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 ABCC13Q9NSE7 274 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 AIPL1Q9NZN9 384 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 DNMT3LQ9UJW3 386 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 CAPN11Q9UMQ6 739 aa14.8□□□□□ -0.04
SSBP3-208ENST00000444533 PIK3R2O00459 728 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 ZNF263O14978 683 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 DCXO43602 365 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 OAS1P00973 400 aaKnown RBP14.79□□□□□ -0.04
SSBP3-208ENST00000444533 ZDHHC11BP0C7U3 371 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 NSFP46459 744 aaKnown RBP14.79□□□□□ -0.04
SSBP3-208ENST00000444533 DAOAP59103 153 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 TDRD12Q587J7 1177 aaKnown RBP14.79□□□□□ -0.04
SSBP3-208ENST00000444533 EFHC1Q5JVL4 640 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 TANGO2Q6ICL3 276 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 KLHDC10Q6PID8 442 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 TMEM110Q86TL2 294 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 VSTM4Q8IW00 320 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 MFSD6LQ8IWD5 586 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 SCUBE3Q8IX30 993 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 SLC44A3Q8N4M1 653 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 RSAD2Q8WXG1 361 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 BAP1Q92560 729 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 SYN2Q92777 582 aaPredicted RBP14.79□□□□□ -0.04
SSBP3-208ENST00000444533 IRF7Q92985 503 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 DOCK6Q96HP0 2047 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 CYP2S1Q96SQ9 504 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 AGPAT1Q99943 283 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 SLC4A5Q9BY07 1137 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 BRD9Q9H8M2 597 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 MUTYHQ9UIF7 546 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 NOCTQ9UK39 431 aaKnown RBP14.79□□□□□ -0.04
SSBP3-208ENST00000444533 LSM7Q9UK45 103 aaKnown RBP14.79□□□□□ -0.04
SSBP3-208ENST00000444533 FBXL21Q9UKT6 434 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 ARHGAP26Q9UNA1 814 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 SH3BP1Q9Y3L3 701 aa14.79□□□□□ -0.04
SSBP3-208ENST00000444533 NOTCH4Q99466 2003 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 GREB1Q4ZG55 1949 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 GOLGA6L6A8MZA4 724 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 E5RJQ4 531 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 SLC9A3R1O14745 358 aaPredicted RBP14.78□□□□□ -0.04
SSBP3-208ENST00000444533 COCHO43405 550 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 LTFP02788 710 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 SRFP11831 508 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 VIPR2P41587 438 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 SLC7A9P82251 487 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 COG7P83436 770 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 ARHGAP29Q52LW3 1261 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 NAA35Q5VZE5 725 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 BSPRYQ5W0U4 402 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 OR6B2Q6IFH4 312 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 GPIHBP1Q8IV16 184 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 CNGA4Q8IV77 575 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 DRC7Q8IY82 874 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 ZNF276Q8N554 614 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 CSGALNACT1Q8TDX6 532 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 DDX1Q92499 740 aaKnown RBP14.78□□□□□ -0.04
SSBP3-208ENST00000444533 USP13Q92995 863 aaPredicted RBP14.78□□□□□ -0.04
SSBP3-208ENST00000444533 C18orf8Q96DM3 657 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 TTYH3Q9C0H2 523 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 CCSER2Q9H7U1 834 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.78□□□□□ -0.04
SSBP3-208ENST00000444533 SMPD4Q9NXE4 827 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 DUSP12Q9UNI6 340 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 CPQQ9Y646 472 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 SPTBN5Q9NRC6 3674 aaKnown RBP14.78□□□□□ -0.04
SSBP3-208ENST00000444533 PATJQ8NI35 1801 aa14.78□□□□□ -0.04
SSBP3-208ENST00000444533 SERPING1P05155 500 aa14.77□□□□□ -0.05
SSBP3-208ENST00000444533 GLI1P08151 1106 aa14.77□□□□□ -0.05
SSBP3-208ENST00000444533 CFHP08603 1231 aa14.77□□□□□ -0.05
SSBP3-208ENST00000444533 DESP17661 470 aa14.77□□□□□ -0.05
SSBP3-208ENST00000444533 GDI1P31150 447 aa14.77□□□□□ -0.05
SSBP3-208ENST00000444533 CASP14P31944 242 aa14.77□□□□□ -0.05
SSBP3-208ENST00000444533 CDH5P33151 784 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms