RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 DDX42Q86XP3 938 aaKnown RBP eCLIP18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 FAM71AQ8IYT1 594 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 FLCNQ8NFG4 579 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 NEK11Q8NG66 645 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 SLC35F5Q8WV83 523 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 ZFYVE19Q96K21 471 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 STK33Q9BYT3 514 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 ULBP1Q9BZM6 244 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 GANQ9H2C0 597 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 ACP6Q9NPH0 428 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 SMPD4Q9NXE4 827 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 SIK3Q9Y2K2 1263 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 CPQQ9Y646 472 aa18.36■□□□□ 0.53
SMARCAL1-209ENST00000444508 LEFTY2O00292 366 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 PNMA6AP0CW24 399 aaPredicted RBP18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 RALAP11233 206 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 RARGP13631 454 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 LCP1P13796 627 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 TCF3P15923 654 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 PGFP49763 221 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 RGS7P49802 495 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 POLR2FP61218 127 aaKnown RBP18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 PMF1Q6P1K2 205 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 DENND1BQ6P3S1 775 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 LUZP1Q86V48 1076 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 HSFY1Q96LI6 401 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 ERGIC2Q96RQ1 377 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 CDK5RAP1Q96SZ6 601 aaKnown RBP18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 NMUR1Q9HB89 426 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 CYLDQ9NQC7 956 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 HEBP1Q9NRV9 189 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 GKN1Q9NS71 199 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 CLIC5Q9NZA1 410 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 TICRRQ7Z2Z1 1910 aa18.35■□□□□ 0.53
SMARCAL1-209ENST00000444508 ZDBF2Q9HCK1 2354 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 F8VZ95 297 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 ARNTLO00327 626 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 SERPINC1P01008 464 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 CLCN1P35523 988 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 KRT9P35527 623 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 KPNA1P52294 538 aaPredicted RBP18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 YWHAGP61981 247 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 PDGFRLQ15198 375 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 C10orf120Q5SQS8 335 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 PM20D1Q6GTS8 502 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 TPRG1Q6ZUI0 275 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 SCD5Q86SK9 330 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 SLC47A2Q86VL8 602 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 SPAG5Q96R06 1193 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 TBC1D17Q9HA65 648 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 CNGB3Q9NQW8 809 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 ST7Q9NRC1 585 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 OSER1Q9NX31 292 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 DUS2Q9NX74 493 aaKnown RBP18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 PIAS3Q9Y6X2 628 aa18.34■□□□□ 0.53
SMARCAL1-209ENST00000444508 KIF26AQ9ULI4 1882 aaPredicted RBP18.33■□□□□ 0.53
SMARCAL1-209ENST00000444508 FBXO21O94952 628 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 GPD2P43304 727 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 ACADSBP45954 432 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 IFNAR2P48551 515 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 STARD6P59095 220 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 GOLGA8FQ08AF8 430 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 GOLGA8DPQ0D2H9 430 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 ITPRIPL2Q3MIP1 535 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 IER5LQ5T953 404 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 ASTLQ6HA08 431 aaPredicted RBP18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 KLHDC10Q6PID8 442 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 RSRC2Q7L4I2 434 aaKnown RBP18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 RIN3Q8TB24 985 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 STK32AQ8WU08 396 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 OSCP1Q8WVF1 389 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 FAM83CQ9BQN1 747 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 PDCL3Q9H2J4 239 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 NLRC4Q9NPP4 1024 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 RTN4Q9NQC3 1192 aaKnown RBP18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 CFAP97Q9P2B7 532 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 PCDHGC3Q9UN70 934 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 CEP83Q9Y592 693 aa18.33■□□□□ 0.52
SMARCAL1-209ENST00000444508 PIK3R2O00459 728 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 MAN2B1O00754 1011 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 TBX18O95935 607 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 GLULP15104 373 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 ZXDBP98169 803 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 TNK2Q07912 1038 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 BTBD8Q5XKL5 378 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 ZNF852Q6ZMS4 543 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 SCML4Q8N228 414 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 ZNF276Q8N554 614 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 KIAA1958Q8N8K9 716 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 TTC8Q8TAM2 541 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 IRGQQ8WZA9 623 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 GOLGA1Q92805 767 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 ATP2A3Q93084 1043 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 MSANTD3Q96H12 275 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 NOX5Q96PH1 765 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 TSPY26PQ9H489 355 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 EBF3Q9H4W6 596 aa18.32■□□□□ 0.52
SMARCAL1-209ENST00000444508 C8orf33Q9H7E9 229 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms