RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 KLHL10Q6JEL2 608 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 RHBDF2Q6PJF5 856 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 SCD5Q86SK9 330 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 ELOA2Q8IYF1 753 aaPredicted RBP11.49□□□□□ -0.57
SF3A1-203ENST00000444440 UBR7Q8N806 425 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 PDZD8Q8NEN9 1154 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 P2RY11Q96G91 374 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 TSG101Q99816 390 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 FAM126AQ9BYI3 521 aaPredicted RBP11.49□□□□□ -0.57
SF3A1-203ENST00000444440 EHD2Q9NZN4 543 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 NUDT5Q9UKK9 219 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 CTNND2Q9UQB3 1225 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 CEP250Q9BV73 2442 aa11.49□□□□□ -0.57
SF3A1-203ENST00000444440 A0A1W2PQH9 124 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 K7EQS6 105 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 TLR5O60602 858 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 NFATC1O95644 943 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 CALCAP01258 141 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 ACO1P21399 889 aaKnown RBP11.48□□□□□ -0.57
SF3A1-203ENST00000444440 DRD1P21728 446 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 TGM1P22735 817 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 TUBP50607 506 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 PDE6CP51160 858 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 KIF11P52732 1056 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 STX17P56962 302 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 LRMPQ12912 555 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 TTC30AQ86WT1 665 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 BBS7Q8IWZ6 715 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 PHTF2Q8N3S3 785 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 SYNPOQ8N3V7 929 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 RPLP0P6Q8NHW5 317 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 NELFBQ8WX92 580 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 RUBCNQ92622 972 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 KAT5Q92993 513 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 HHIPQ96QV1 700 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 MED15Q96RN5 788 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 KLF16Q9BXK1 252 aaPredicted RBP11.48□□□□□ -0.57
SF3A1-203ENST00000444440 DUSP16Q9BY84 665 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 PARD6AQ9NPB6 346 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 ZDHHC4Q9NPG8 344 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 COMMD8Q9NX08 183 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 SCML2Q9UQR0 700 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 MUC22E2RYF6 1773 aaPredicted RBP11.48□□□□□ -0.57
SF3A1-203ENST00000444440 CKAP5Q14008 2032 aa11.48□□□□□ -0.57
SF3A1-203ENST00000444440 PI4KAP42356 2102 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 E2F8A0AVK6 867 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 PSMA7O14818 248 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 TRIM24O15164 1050 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 HNRNPLP14866 589 aaKnown RBP eCLIP11.47□□□□□ -0.57
SF3A1-203ENST00000444440 FMO5P49326 533 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 NRLP54845 237 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 SEC13P55735 322 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 CUL2Q13617 745 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 LY6G5CQ5SRR4 150 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 BHLHA9Q7RTU4 235 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 WDR5BQ86VZ2 330 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 LONP2Q86WA8 852 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 LMO3Q8TAP4 145 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 NDRG1Q92597 394 aaKnown RBP11.47□□□□□ -0.57
SF3A1-203ENST00000444440 TMEM176AQ96HP8 235 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 DHTKD1Q96HY7 919 aaPredicted RBP11.47□□□□□ -0.57
SF3A1-203ENST00000444440 HEXIM2Q96MH2 286 aaKnown RBP11.47□□□□□ -0.57
SF3A1-203ENST00000444440 HINFPQ9BQA5 517 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 ZSWIM1Q9BR11 485 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 FBXO44Q9H4M3 255 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 PNPLA8Q9NP80 782 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 TLR8Q9NR97 1041 aaKnown RBP11.47□□□□□ -0.57
SF3A1-203ENST00000444440 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
SF3A1-203ENST00000444440 ARMCX3Q9UH62 379 aaPredicted RBP11.47□□□□□ -0.57
SF3A1-203ENST00000444440 USP3Q9Y6I4 520 aa11.47□□□□□ -0.57
SF3A1-203ENST00000444440 RNF225M0QZC1 329 aaPredicted RBP11.46□□□□□ -0.57
SF3A1-203ENST00000444440 STX10O60499 249 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 GABBR2O75899 941 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 ADH5P11766 374 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 KDSRQ06136 332 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 PPP2R5DQ14738 602 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 CAMK4Q16566 473 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 EMC10Q5UCC4 262 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 PRR23BQ6ZRT6 265 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 CCDC186Q7Z3E2 898 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 TMEM25Q86YD3 366 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 ARHGEF19Q8IW93 802 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 ETFBKMTQ8IXQ9 262 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 CCDC150Q8NCX0 1101 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 USP33Q8TEY7 942 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 TFAP2BQ92481 460 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 RMDN1Q96DB5 314 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 FAXDC2Q96IV6 333 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 CEP63Q96MT8 703 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 NCDNQ9UBB6 729 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 HCN2Q9UL51 889 aa11.46□□□□□ -0.57
SF3A1-203ENST00000444440 TP53BP1Q12888 1972 aaPredicted RBP11.46□□□□□ -0.58
SF3A1-203ENST00000444440 RARGP13631 454 aa11.45□□□□□ -0.58
SF3A1-203ENST00000444440 HOXA6P31267 233 aa11.45□□□□□ -0.58
SF3A1-203ENST00000444440 AMPD2Q01433 879 aa11.45□□□□□ -0.58
SF3A1-203ENST00000444440 PDE4CQ08493 712 aa11.45□□□□□ -0.58
SF3A1-203ENST00000444440 NR1H3Q13133 447 aa11.45□□□□□ -0.58
SF3A1-203ENST00000444440 SIM2Q14190 667 aaPredicted RBP11.45□□□□□ -0.58
SF3A1-203ENST00000444440 DMC1Q14565 340 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms