RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 TCF3P15923 654 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 ATF6P18850 670 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TGM2P21980 687 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 RNASE9P60153 205 aaKnown RBP7.79□□□□□ -1.16
SSXP3-201ENST00000442971 ZC2HC1CQ53FD0 456 aaPredicted RBP7.79□□□□□ -1.16
SSXP3-201ENST00000442971 XKR3Q5GH77 459 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 GLRA4Q5JXX5 417 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 RHBDF2Q6PJF5 856 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 RBM44Q6ZP01 1051 aaKnown RBP7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TBC1D10CQ8IV04 446 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TERB1Q8NA31 727 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 GIPC2Q8TF65 315 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 NDRG1Q92597 394 aaKnown RBP7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TMEM143Q96AN5 459 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 ARRDC3Q96B67 414 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 SIPA1Q96FS4 1042 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 SLITRK1Q96PX8 696 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 ORAI3Q9BRQ5 295 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 SLC29A3Q9BZD2 475 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TRIM8Q9BZR9 551 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 RNF41Q9H4P4 317 aaPredicted RBP7.79□□□□□ -1.16
SSXP3-201ENST00000442971 PRKRIP1Q9H875 184 aaPredicted RBP7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TRPC7Q9HCX4 862 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 DISC1Q9NRI5 854 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TNNQ9UQP3 1299 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 NUB1Q9Y5A7 615 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 PCDHB6Q9Y5E3 794 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 PRRC2AP48634 2157 aaKnown RBP7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TRIP11Q15643 1979 aa7.79□□□□□ -1.16
SSXP3-201ENST00000442971 TRAV19A0A0A6YYK7 116 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 WASH3PC4AMC7 463 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 NVLO15381 856 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 B4GALT5O43286 388 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 CNTN5O94779 1100 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 STBD1O95210 358 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ADH1CP00326 375 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 SNRPB2P08579 225 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 NFICP08651 508 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ACADMP11310 421 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ADH5P11766 374 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 FOSL1P15407 271 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 BPIP17213 487 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ACSL1P33121 698 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 GRIK1P39086 918 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 TUFMP49411 452 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 BCAT1P54687 386 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 PTENP60484 403 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 PPP2R2AP63151 447 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 SEPT6Q14141 434 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 DHX8Q14562 1220 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 HS1BP3Q53T59 392 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ZRANB3Q5FWF4 1079 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 IFIT1BQ5T764 474 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 TCTN3Q6NUS6 607 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 CEP85Q6P2H3 762 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ASB18Q6ZVZ8 466 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 FILIP1Q7Z7B0 1213 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ZFAND4Q86XD8 727 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 DTX1Q86Y01 620 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 TMPRSS6Q8IU80 811 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 OXR1Q8N573 874 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 LRRC15Q8TF66 581 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 APOBEC4Q8WW27 367 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 PRCCQ92733 491 aaPredicted RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 RRP36Q96EU6 259 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 SUSD3Q96L08 255 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 SLC6A18Q96N87 628 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 SEPT5Q99719 369 aaPredicted RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 OXCT2Q9BYC2 517 aaPredicted RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 DEC1Q9P2X7 70 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 HSFX1Q9UBD0 423 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 KCND3Q9UK17 655 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 RPH3AQ9Y2J0 694 aaPredicted RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 FAM86B1E9PN63 330 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 GFRA2O00451 464 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 PODXLO00592 558 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ASAP2O43150 1006 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 FAM86B2P0C5J1 330 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 TRIM27P14373 513 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 HMGA1P17096 107 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 MARCKSP29966 332 aaPredicted RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 UGT1A5P35504 534 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ATP2C1P98194 919 aaPredicted RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 YWHAHQ04917 246 aaPredicted RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ADAM9Q13443 819 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 STARD3Q14849 445 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ZRSR2Q15696 482 aaKnown RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 TMEM198Q66K66 360 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 SIRT2Q8IXJ6 389 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 FBXO39Q8N4B4 442 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 NAT16Q8N8M0 369 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 OR4C6Q8NH72 309 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 OTUD7AQ8TE49 926 aaPredicted RBP7.78□□□□□ -1.16
SSXP3-201ENST00000442971 NUDT8Q8WV74 236 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 CENPTQ96BT3 561 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 PGBD1Q96JS3 809 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 ERVMER34-1Q9H9K5 563 aa7.78□□□□□ -1.16
SSXP3-201ENST00000442971 CKAP5Q14008 2032 aa7.77□□□□□ -1.17
SSXP3-201ENST00000442971 MEGF8Q7Z7M0 2845 aa7.77□□□□□ -1.17
SSXP3-201ENST00000442971 IGLV3-22A0A075B6J6 115 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms