RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CDR1P51861 262 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 TAS2R40P59535 323 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 C2orf54Q08AI8 447 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 ACAP1Q15027 740 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 DAB2IPQ5VWQ8 1189 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 CCDC70Q6NSX1 233 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 FUT10Q6P4F1 479 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 UBE2Q1Q7Z7E8 422 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 CEP57Q86XR8 500 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 FAM81AQ8TBF8 368 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 ZFAND2BQ8WV99 257 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 PIWIL1Q96J94 861 aaKnown RBP8.46□□□□□ -1.06
CCDC39-201ENST00000442201 CNPY3Q9BT09 278 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 MARCH5Q9NX47 278 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 TMEM59LQ9UK28 342 aa8.46□□□□□ -1.06
CCDC39-201ENST00000442201 TTC3P53804 2025 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 NT5C1B-RDH14C9J2C7 533 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 LIN7AO14910 233 aaPredicted RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 OPA1O60313 960 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 GRAP2O75791 330 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 BEST1O76090 585 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 PYGMP11217 842 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 DESP17661 470 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 GPD1P21695 349 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 ZNF143P52747 638 aaPredicted RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 ADIGQ0VDE8 80 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 VARS2Q5ST30 1063 aaKnown RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 LRRC38Q5VT99 294 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 C4orf50Q6ZRC1 276 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 SLC26A9Q7LBE3 791 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 CCDC50Q8IVM0 306 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 DCP1BQ8IZD4 617 aaKnown RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 SIX6OS1Q8N1H7 587 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 RXFP2Q8WXD0 754 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 PKMYT1Q99640 499 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 SMOQ99835 787 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 GPR62Q9BZJ7 368 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 KLC4Q9NSK0 619 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 ASNSD1Q9NWL6 643 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 C2CD4BA6NLJ0 364 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 KRIT1O00522 736 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 BAIAP3O94812 1187 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 ACRP10323 421 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 BDNFP23560 247 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 GJC1P36383 396 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 FLT3P36888 993 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 PBX3P40426 434 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 WDR5P61964 334 aaKnown RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 NFE2Q16621 373 aaPredicted RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 HADHQ16836 314 aaKnown RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 EFHC1Q5JVL4 640 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 ZFYVE27Q5T4F4 411 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 ZNF280DQ6N043 979 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 LRRTM3Q86VH5 581 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 SPATA2LQ8IUW3 424 aaPredicted RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 MMGT1Q8N4V1 131 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 SPDL1Q96EA4 605 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 TMEM209Q96SK2 561 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 ARPC5LQ9BPX5 153 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 YIPF2Q9BWQ6 316 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 VIPAS39Q9H9C1 493 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 IL23AQ9NPF7 189 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 RBM12Q9NTZ6 932 aaKnown RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 CAPN7Q9Y6W3 813 aa8.45□□□□□ -1.06
CCDC39-201ENST00000442201 TDRD15B5MCY1 1934 aaKnown RBP8.45□□□□□ -1.06
CCDC39-201ENST00000442201 SCN5AQ14524 2016 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 RHOXF2BP0C7M4 288 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 FGFR3P22607 806 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 SDC4P31431 198 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CETN2P41208 172 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 TKTL1P51854 596 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 DEFB103AP81534 67 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 DEUP1Q05D60 604 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 TAF5Q15542 800 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CTXN3Q4LDR2 81 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 ODF2Q5BJF6 829 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 FAM117BQ6P1L5 589 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 TRIM42Q8IWZ5 723 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 KATNAL2Q8IYT4 538 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 B4GALNT2Q8NHY0 566 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 KCNK16Q96T55 309 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 RHOXF2Q9BQY4 288 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 PLEKHA4Q9H4M7 779 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 FAM204AQ9H8W3 233 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CSNK1G1Q9HCP0 422 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 DMAP1Q9NPF5 467 aaPredicted RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 TMLHEQ9NVH6 421 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 GOLGA6L10A0A0M3HER8 536 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 OR6C75A6NL08 312 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CCDC188H7C350 402 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 SART1O43290 800 aaKnown RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 LRCH4O75427 683 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 FBXO21O94952 628 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 HSP90B2PQ58FF3 399 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 SPOUT1Q5T280 376 aaKnown RBP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 ARCQ7LC44 396 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 ZMIZ2Q8NF64 920 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 CLEC4CQ8WTT0 213 aa8.44□□□□□ -1.06
CCDC39-201ENST00000442201 KHSRPQ92945 711 aaKnown RBP eCLIP8.44□□□□□ -1.06
CCDC39-201ENST00000442201 FAM149B1Q96BN6 582 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms