RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 ANKRD52Q8NB46 1076 aa11.77□□□□□ -0.53
NELFE-205ENST00000441998 SEMA4DQ92854 862 aa11.77□□□□□ -0.53
NELFE-205ENST00000441998 SLC35C1Q96A29 364 aa11.77□□□□□ -0.53
NELFE-205ENST00000441998 ZFRQ96KR1 1074 aaKnown RBP11.77□□□□□ -0.53
NELFE-205ENST00000441998 HEXIM2Q96MH2 286 aaKnown RBP11.77□□□□□ -0.53
NELFE-205ENST00000441998 IPO9Q96P70 1041 aaKnown RBP11.77□□□□□ -0.53
NELFE-205ENST00000441998 TWNKQ96RR1 684 aa11.77□□□□□ -0.53
NELFE-205ENST00000441998 FBRSL1Q9HCM7 1045 aaKnown RBP11.77□□□□□ -0.53
NELFE-205ENST00000441998 HMGXB4Q9UGU5 601 aa11.77□□□□□ -0.53
NELFE-205ENST00000441998 SH3BP1Q9Y3L3 701 aa11.77□□□□□ -0.53
NELFE-205ENST00000441998 SPTBN4Q9H254 2564 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 HOXC11O43248 304 aaPredicted RBP11.76□□□□□ -0.53
NELFE-205ENST00000441998 HRO43593 1189 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 RNF40O75150 1001 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 CYP17A1P05093 508 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 OPRD1P41143 372 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 GRIA2P42262 883 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 TNFRSF4P43489 277 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 PLA2G4AP47712 749 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 ID4P47928 161 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 FNTBP49356 437 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 MARSP56192 900 aaKnown RBP11.76□□□□□ -0.53
NELFE-205ENST00000441998 LMNB2Q03252 620 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 CUL2Q13617 745 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 MORC3Q14149 939 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 PUM1Q14671 1186 aaKnown RBP eCLIP11.76□□□□□ -0.53
NELFE-205ENST00000441998 SLC4A11Q8NBS3 891 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 GAB3Q8WWW8 586 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 ZC3H10Q96K80 434 aaKnown RBP11.76□□□□□ -0.53
NELFE-205ENST00000441998 PNKPQ96T60 521 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 HINFPQ9BQA5 517 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 KLF16Q9BXK1 252 aaPredicted RBP11.76□□□□□ -0.53
NELFE-205ENST00000441998 NACA2Q9H009 215 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 FAM49BQ9NUQ9 324 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 GMIPQ9P107 970 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 MAN1B1Q9UKM7 699 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 ZNF510Q9Y2H8 683 aa11.76□□□□□ -0.53
NELFE-205ENST00000441998 COL4A3Q01955 1670 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 PPP1R3GB7ZBB8 358 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 FGFR1OPO95684 399 aaKnown RBP11.75□□□□□ -0.53
NELFE-205ENST00000441998 APBB3O95704 486 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 RALAP11233 206 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 CD58P19256 250 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 ACO1P21399 889 aaKnown RBP11.75□□□□□ -0.53
NELFE-205ENST00000441998 ADORA2BP29275 332 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 PMS1P54277 932 aaKnown RBP11.75□□□□□ -0.53
NELFE-205ENST00000441998 RAD23BP54727 409 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 COG7P83436 770 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
NELFE-205ENST00000441998 STILQ15468 1287 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 GAB4Q2WGN9 574 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 CBWD6Q4V339 395 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 RAB41Q5JT25 222 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 CBWD3Q5JTY5 395 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 CBWD5Q5RIA9 395 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 PPP1R26Q5T8A7 1209 aaPredicted RBP11.75□□□□□ -0.53
NELFE-205ENST00000441998 TCERG1LQ5VWI1 586 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 BTBD8Q5XKL5 378 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 TTI2Q6NXR4 508 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 CACNA2D4Q7Z3S7 1137 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 SCML4Q8N228 414 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 USP33Q8TEY7 942 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 JAKMIP2Q96AA8 810 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 CCSER2Q9H7U1 834 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 MMRN2Q9H8L6 949 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.75□□□□□ -0.533e-9■■■■■ 65.2
NELFE-205ENST00000441998 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.75□□□□□ -0.53
NELFE-205ENST00000441998 SMPD4Q9NXE4 827 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 DLL3Q9NYJ7 618 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 MARK1Q9P0L2 795 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 WDR35Q9P2L0 1181 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 DNMT3LQ9UJW3 386 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 MIA3Q5JRA6 1907 aa11.75□□□□□ -0.53
NELFE-205ENST00000441998 K7EQS6 105 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 GREM1O60565 184 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 KAT7O95251 611 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 APODP05090 189 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 PAEPP09466 180 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 VDRP11473 427 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 ADH5P11766 374 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 RARGP13631 454 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 TGM1P22735 817 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 FMO5P49326 533 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 DGKEP52429 567 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 UBE2HP62256 183 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 ORC1Q13415 861 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 E2F5Q15329 346 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 DCAF17Q5H9S7 520 aaPredicted RBP11.74□□□□□ -0.53
NELFE-205ENST00000441998 PM20D1Q6GTS8 502 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 TRMT11Q7Z4G4 463 aaKnown RBP11.74□□□□□ -0.53
NELFE-205ENST00000441998 ETFBKMTQ8IXQ9 262 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 TTC16Q8NEE8 873 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 RPLP0P6Q8NHW5 317 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 EZH1Q92800 747 aaPredicted RBP11.74□□□□□ -0.53
NELFE-205ENST00000441998 TATDN2Q93075 761 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 EEF2KMTQ96G04 330 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 FAM81BQ96LP2 452 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 DCLK3Q9C098 648 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 SPHK2Q9NRA0 654 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms