RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SLCO4C1Q6ZQN7 724 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MIGA2Q7L4E1 593 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ZNF804AQ7Z570 1209 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 OR52K1Q8NGK4 314 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 IL31RAQ8NI17 732 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 AGR3Q8TD06 166 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ZFAND2BQ8WV99 257 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RAPGEF5Q92565 580 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KRT35Q92764 455 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PPP1R13BQ96KQ4 1090 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SAMD11Q96NU1 681 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 OR10A4Q9H209 315 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ACSS3Q9H6R3 686 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NRDE2Q9H7Z3 1164 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 JMJD4Q9H9V9 463 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PDE7BQ9NP56 450 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 OBP2BQ9NPH6 170 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ADPRHL2Q9NX46 363 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HOOK1Q9UJC3 728 aaKnown RBP6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ITGB1BP2Q9UKP3 347 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TNNQ9UQP3 1299 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CDK12Q9NYV4 1490 aaPredicted RBP6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 AKAP12Q02952 1782 aa6.2□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PLEKHG1Q9ULL1 1385 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RGSL1A5PLK6 1076 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ISM1B1AKI9 464 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 F8W8V4 182 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RNF113AO15541 343 aaKnown RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PRPSAP2O60256 369 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NPHS1O60500 1241 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SEC22BO75396 215 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PAPLNO95428 1278 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HMOX1P09601 288 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 EPXP11678 715 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CSF2RAP15509 400 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LAG3P18627 525 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GPTP24298 496 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HOXA11P31270 313 aaPredicted RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 IL13P35225 146 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HNMTP50135 292 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NR1H2P55055 460 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FMO1Q01740 532 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SLC14A1Q13336 389 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SNX1Q13596 522 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TUBA3CQ13748 450 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ZNF792Q3KQV3 632 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 JMJD6Q6NYC1 403 aaPredicted RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 IYDQ6PHW0 289 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LRRTM4Q86VH4 590 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KRT73Q86Y46 540 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 DTWD1Q8N5C7 304 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CDKL2Q92772 493 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CABS1Q96KC9 395 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TCF25Q9BQ70 676 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 STK33Q9BYT3 514 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CD244Q9BZW8 370 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 EPB41L1Q9H4G0 881 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 THAP9Q9H5L6 903 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RC3H2Q9HBD1 1191 aaKnown RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GPR108Q9NPR9 543 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 AP5S1Q9NUS5 200 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 AKAP7Q9P0M2 348 aaPredicted RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 EXTL2Q9UBQ6 330 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ADD3Q9UEY8 706 aaKnown RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RPS6KA6Q9UK32 745 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 EXOC6BQ9Y2D4 811 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CFAP20Q9Y6A4 193 aaKnown RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NUMBLQ9Y6R0 609 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CNTNAP4Q9C0A0 1308 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 A0A1B0GUA9 196 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 A0A1W2PPC4 97 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SSU72P8A0A1W2PR75 194 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LGALS16A8MUM7 142 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RANBP6O60518 1105 aaKnown RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ERLIN2O94905 339 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TRIM16O95361 564 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ITGB1P05556 798 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SYPP08247 313 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 SLC7A1P30825 629 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HOXD13P35453 343 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GPC3P51654 580 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 HDAC4P56524 1084 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TGFB2P61812 414 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 GNAI1P63096 354 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 IL10RAQ13651 578 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 FBXO47Q5MNV8 452 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 CATSPEREQ5SY80 951 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NAA16Q6N069 864 aaPredicted RBP6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 LRRC31Q6UY01 552 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TAOK1Q7L7X3 1001 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 RAB11FIP2Q7L804 512 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 BNIPLQ7Z465 357 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TTC7BQ86TV6 843 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 ITPRIPQ8IWB1 547 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TTC39CQ8N584 583 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 NAT16Q8N8M0 369 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 PIP4K2CQ8TBX8 421 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 MIPOL1Q8TD10 442 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 TCP11Q8WWU5 503 aa6.19□□□□□ -1.42
ALMS1-IT1-201ENST00000441587 KAT5Q92993 513 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms