RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 AJAP1Q9UKB5 411 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC12-209ENST00000441099 MRPS17Q9Y2R5 130 aaKnown RBP16.78■□□□□ 0.28
TRAPPC12-209ENST00000441099 WNT6Q9Y6F9 365 aa16.78■□□□□ 0.28
TRAPPC12-209ENST00000441099 BECN2A8MW95 431 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 SPECC1L-ADORA2AF8WAN1 911 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 GABBR2O75899 941 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 RARGP13631 454 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 CTHP32929 405 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 PLA2G4AP47712 749 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 TKTL1P51854 596 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 MYL5Q02045 173 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 KRT31Q15323 416 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 ARHGAP44Q17R89 818 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 KLHL40Q2TBA0 621 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 EML3Q32P44 896 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 SMYD5Q6GMV2 418 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 PM20D1Q6GTS8 502 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 SLC35F5Q8WV83 523 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 KCTD13Q8WZ19 329 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 SHC3Q92529 594 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 CHFRQ96EP1 664 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 CLIC5Q9NZA1 410 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 CFAP97Q9P2B7 532 aa16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 NDRG2Q9UN36 371 aaKnown RBP16.77■□□□□ 0.28
TRAPPC12-209ENST00000441099 COL4A3Q01955 1670 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 ZBED1O96006 694 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 IFNAR2P48551 515 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 PMF1Q6P1K2 205 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 C1orf228Q6PIY5 440 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 BHLHA9Q7RTU4 235 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 DDX42Q86XP3 938 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 ZNF276Q8N554 614 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 ULBP1Q9BZM6 244 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 HSD3B7Q9H2F3 369 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 ECT2Q9H8V3 914 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 ACP6Q9NPH0 428 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 NAGPAQ9UK23 515 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 DNAJC12Q9UKB3 198 aa16.76■□□□□ 0.27
TRAPPC12-209ENST00000441099 M0QYV0 167 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 PES1O00541 588 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 ZNF18P17022 549 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 ATP5C1P36542 298 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 RPS9P46781 194 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 PSEN1P49768 467 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 ANO6Q4KMQ2 910 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 KLHDC7AQ5VTJ3 777 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 KLHDC10Q6PID8 442 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 ADGRG2Q8IZP9 1017 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 NDRG1Q92597 394 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 SECISBP2LQ93073 1101 aaKnown RBP16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 ATP2A3Q93084 1043 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 WBP2Q969T9 261 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 KLF16Q9BXK1 252 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 VPS16Q9H269 839 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 LRRC4Q9HBW1 653 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 NUDT5Q9UKK9 219 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 WDFY4Q6ZS81 3184 aa16.75■□□□□ 0.27
TRAPPC12-209ENST00000441099 E2F8A0AVK6 867 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 LRRC10BA6NIK2 292 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 FOXN3O00409 490 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 SCAMP3O14828 347 aaKnown RBP16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 NCAM2O15394 837 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 GREM1O60565 184 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 LETM1O95202 739 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 CHRNB1P11230 501 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 GJA4P35212 333 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 GPD2P43304 727 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 MAGEA9P43362 315 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 PTPN5P54829 565 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 YWHAGP61981 247 aaKnown RBP eCLIP16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 ADIGQ0VDE8 80 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 MEA1Q16626 185 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 DENND1BQ6P3S1 775 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 SCML4Q8N228 414 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 ARHGAP18Q8N392 663 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 CPA6Q8N4T0 437 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 AOPEPQ8N6M6 819 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 ZNF606Q8WXB4 792 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 BPIFA3Q9BQP9 254 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 NAA15Q9BXJ9 866 aaKnown RBP16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 NACA2Q9H009 215 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 LMAN1LQ9HAT1 526 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 LIMA1Q9UHB6 759 aaKnown RBP16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 DNMT3LQ9UJW3 386 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 PTPRDP23468 1912 aa16.74■□□□□ 0.27
TRAPPC12-209ENST00000441099 SLC9A3R1O14745 358 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 MDM4O15151 490 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 THAP12O43422 761 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 NFATC1O95644 943 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 RALAP11233 206 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 GNA15P30679 374 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 USP8P40818 1118 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 RPL34P49207 117 aaKnown RBP16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 RGS7P49802 495 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 COPB1P53618 953 aaKnown RBP16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 PON2Q15165 354 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 C10orf120Q5SQS8 335 aa16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 APTXQ7Z2E3 356 aaKnown RBP16.73■□□□□ 0.27
TRAPPC12-209ENST00000441099 HSFY1Q96LI6 401 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms