RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 C6orf118Q5T5N4 469 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 FAM102AQ5T9C2 384 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-209ENST00000440653 CYP4A22Q5TCH4 519 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 LLGL2Q6P1M3 1020 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 BBS12Q6ZW61 710 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 ARCQ7LC44 396 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 TMCO2Q7Z6W1 182 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-209ENST00000440653 DEFB128Q7Z7B8 93 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 PCGF5Q86SE9 256 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 HERC6Q8IVU3 1022 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 ZCCHC9Q8N567 271 aaKnown RBP9.57□□□□□ -0.88
HDAC6-209ENST00000440653 WDTC1Q8N5D0 677 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 ALLCQ8N6M5 410 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 TEKT4Q8WW24 435 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 C1orf54Q8WWF1 131 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 ATG4AQ8WYN0 398 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 KAT2BQ92831 832 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 ZNF668Q96K58 619 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-209ENST00000440653 CPXM1Q96SM3 734 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 PPP1R16BQ96T49 567 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 OSMRQ99650 979 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 CNPY3Q9BT09 278 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 FAM49AQ9H0Q0 323 aaPredicted RBP9.57□□□□□ -0.88
HDAC6-209ENST00000440653 IRF2BPLQ9H1B7 796 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 EPB41L4BQ9H329 900 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 SETD4Q9NVD3 440 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 HMGXB4Q9UGU5 601 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 TSPAN16Q9UKR8 245 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 PIN4Q9Y237 131 aaKnown RBP9.57□□□□□ -0.88
HDAC6-209ENST00000440653 NEU2Q9Y3R4 380 aa9.57□□□□□ -0.88
HDAC6-209ENST00000440653 PATJQ8NI35 1801 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 ZNF292O60281 2723 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 FAM170AA1A519 330 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 CFAP69A5D8W1 941 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 GOLGA8SH3BPF8 625 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 APOC4-APOC2K7ER74 178 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 DNALI1O14645 258 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 RGS16O15492 202 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 DYNC1LI2O43237 492 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 ADCY6O43306 1168 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 TCEA3O75764 348 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 APOC2P02655 101 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 KLRC2P26717 231 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 HOXA11P31270 313 aaPredicted RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 FLT3P36888 993 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 ADCY8P40145 1251 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 MDH1P40925 334 aaKnown RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 IRAK1P51617 712 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 ITGA8P53708 1063 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 OGDHQ02218 1023 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 BST2Q10589 180 aaKnown RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 TFDP2Q14188 446 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 OASLQ15646 514 aaKnown RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 ZBTB6Q15916 424 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 FSCN1Q16658 493 aaKnown RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 GOLGA7BQ2TAP0 167 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 XKR4Q5GH76 650 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 FBXO47Q5MNV8 452 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 IZUMO3Q5VZ72 239 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 KCTD16Q68DU8 428 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 MFSD7Q6UXD7 560 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 EP400NLQ6ZTU2 488 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 GSTA5Q7RTV2 222 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 RSPH3Q86UC2 560 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 MAP7D3Q8IWC1 876 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 SH2D3CQ8N5H7 860 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 ZBTB10Q96DT7 871 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 TNIP3Q96KP6 325 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 HEXIM2Q96MH2 286 aaKnown RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 SERPINB12Q96P63 405 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 TWNKQ96RR1 684 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 TRPV6Q9H1D0 765 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 CDC42EP4Q9H3Q1 356 aaKnown RBP9.56□□□□□ -0.88
HDAC6-209ENST00000440653 CENPHQ9H3R5 247 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 RSAD1Q9HA92 442 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 PRDM16Q9HAZ2 1276 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 SPC25Q9HBM1 224 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 SLC38A7Q9NVC3 462 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 GDAP2Q9NXN4 497 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 SLC12A6Q9UHW9 1150 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 ANAPC5Q9UJX4 755 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 PRDM4Q9UKN5 801 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 PTPRSQ13332 1948 aa9.56□□□□□ -0.88
HDAC6-209ENST00000440653 TRIP12Q14669 1992 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 F8VP50 259 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 RASGRF2O14827 1237 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 MCF2LO15068 1137 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 MDM4O15151 490 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 DUSP11O75319 330 aaKnown RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 MYL3P08590 195 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 C6orf222P0C671 652 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 FGFR4P22455 802 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 PAX3P23760 479 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 IVDP26440 423 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 SDC4P31431 198 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 LSP1P33241 339 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 RFC1P35251 1148 aaPredicted RBP9.55□□□□□ -0.88
HDAC6-209ENST00000440653 PTPN9P43378 593 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 ACADSBP45954 432 aa9.55□□□□□ -0.88
HDAC6-209ENST00000440653 KCNJ1P48048 391 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms