RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 UBXN11Q5T124 520 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 ZNF618Q5T7W0 954 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 SH3PXD2AQ5TCZ1 1133 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 ASRGL1Q7L266 308 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 TTC30AQ86WT1 665 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 RNF169Q8NCN4 708 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 FNIP1Q8TF40 1166 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 SH3GL3Q99963 347 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
LIMD1-202ENST00000440097 WHRNQ9P202 907 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 USP18Q9UMW8 372 aa14.78□□□□□ -0.04
LIMD1-202ENST00000440097 SGK1O00141 431 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 LIN7AO14910 233 aaPredicted RBP14.77□□□□□ -0.04
LIMD1-202ENST00000440097 SPTLC1O15269 473 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 ACSL3O95573 720 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 LINGO3P0C6S8 592 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 GPD1P21695 349 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 LMO2P25791 158 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 SLC25A11Q02978 314 aaKnown RBP14.77□□□□□ -0.04
LIMD1-202ENST00000440097 LMNB2Q03252 620 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 SOX4Q06945 474 aaPredicted RBP14.77□□□□□ -0.04
LIMD1-202ENST00000440097 TAF5Q15542 800 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 TAF11Q15544 211 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 GDF6Q6KF10 455 aaPredicted RBP14.77□□□□□ -0.04
LIMD1-202ENST00000440097 SPATA21Q7Z572 469 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 POLNQ7Z5Q5 900 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 ARFGAP1Q8N6T3 406 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 ARRDC4Q8NCT1 418 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.04
LIMD1-202ENST00000440097 RXFP2Q8WXD0 754 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 PWWP2AQ96N64 755 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 ARL2BPQ9Y2Y0 163 aa14.77□□□□□ -0.04
LIMD1-202ENST00000440097 TMEM120BA0PK00 339 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 LIASO43766 372 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 CST8O60676 142 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 KPNA6O60684 536 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 UPP2O95045 317 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 CD48P09326 243 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 CYBAP13498 195 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 GABRB2P47870 512 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 LONRF1Q17RB8 773 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 RFX6Q8HWS3 928 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 ANKRD42Q8N9B4 389 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 SMG8Q8ND04 991 aaKnown RBP14.77□□□□□ -0.05
LIMD1-202ENST00000440097 RMDN2Q96LZ7 410 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 CFAP57Q96MR6 1250 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 TMEM121Q9BTD3 319 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 TRAIPQ9BWF2 469 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 B3GNT5Q9BYG0 378 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 RXFP1Q9HBX9 757 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 XPNPEP3Q9NQH7 507 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 CACNG4Q9UBN1 327 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 GTF2IRD1Q9UHL9 959 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 ST3GAL5Q9UNP4 418 aa14.77□□□□□ -0.05
LIMD1-202ENST00000440097 DESP17661 470 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 PNPLA4P41247 253 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 P3H1Q32P28 736 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 SV2CQ496J9 727 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 IZUMO3Q5VZ72 239 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.76□□□□□ -0.05
LIMD1-202ENST00000440097 NME7Q9Y5B8 376 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 A6NHS1 94 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 MEIS3P2A8K0S8 358 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 FOXO6A8MYZ6 492 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 PRPSAP2O60256 369 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 PFKMP08237 780 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 ZSCAN5DPP0CG00 497 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 LCP1P13796 627 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 ELNP15502 786 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 MLH1P40692 756 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 ARSEP51690 589 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 ZNF143P52747 638 aaPredicted RBP14.76□□□□□ -0.05
LIMD1-202ENST00000440097 GJA9P57773 515 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 AP1ARQ63HQ0 302 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 MFSD5Q6N075 450 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 ADGRF2Q8IZF7 708 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 GDAP1Q8TB36 358 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 CNPY3Q9BT09 278 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 OSBPL1AQ9BXW6 950 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 MAK16Q9BXY0 300 aaKnown RBP14.76□□□□□ -0.05
LIMD1-202ENST00000440097 FAM124BQ9H5Z6 455 aaPredicted RBP14.76□□□□□ -0.05
LIMD1-202ENST00000440097 NOD1Q9Y239 953 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 TRPV2Q9Y5S1 764 aa14.76□□□□□ -0.05
LIMD1-202ENST00000440097 PIRO00625 290 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 LUC7L3O95232 432 aaKnown RBP14.75□□□□□ -0.05
LIMD1-202ENST00000440097 RARGP13631 454 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 KDELR1P24390 212 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 CHKAP35790 457 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 THPOP40225 353 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 CCNG1P51959 295 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 TRIM68Q6AZZ1 485 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 SMYD5Q6GMV2 418 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 VSTM1Q6UX27 236 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 UNC93AQ86WB7 457 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 RNF217Q8TC41 542 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 ARHGEF2Q92974 986 aaKnown RBP14.75□□□□□ -0.05
LIMD1-202ENST00000440097 LPPQ93052 612 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 DNAI2Q9GZS0 605 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 KCNK9Q9NPC2 374 aa14.75□□□□□ -0.05
LIMD1-202ENST00000440097 ZFATQ9P243 1243 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms