RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 SCAMP5Q8TAC9 235 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 ZIM3Q96PE6 472 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 SNRNP25Q9BV90 132 aaKnown RBP15.73■□□□□ 0.11
CPSF7-205ENST00000439958 TMEM39AQ9NV64 488 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 TMEM30AQ9NV96 361 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 TMLHEQ9NVH6 421 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 XPO1O14980 1071 aaKnown RBP15.73■□□□□ 0.11
CPSF7-205ENST00000439958 RNF40O75150 1001 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 SOAT2O75908 522 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 ACSL3O95573 720 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 ACADSBP45954 432 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 PRMT2P55345 433 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 YWHAZP63104 245 aaKnown RBP15.73■□□□□ 0.11
CPSF7-205ENST00000439958 P3H1Q32P28 736 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 SYPL2Q5VXT5 272 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 PYROXD2Q8N2H3 581 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 LRRC45Q96CN5 670 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 CFHR5Q9BXR6 569 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 ANAPC5Q9UJX4 755 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 YJEFN3A6XGL0 299 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 E7ENQ6 273 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 NRP1O14786 923 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 SLCO1A2P46721 670 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 GABRB2P47870 512 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 FNTAP49354 379 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 PAQR9Q6ZVX9 377 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 MYCBPAPQ8TBZ2 947 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 P3H4Q92791 437 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 SMOQ99835 787 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 FAM204AQ9H8W3 233 aa15.73■□□□□ 0.11
CPSF7-205ENST00000439958 FEZ2Q9UHY8 353 aaPredicted RBP15.73■□□□□ 0.11
CPSF7-205ENST00000439958 ATP8B1O43520 1251 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 HPDP32754 393 aaPredicted RBP15.72■□□□□ 0.11
CPSF7-205ENST00000439958 PTGIRP43119 386 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 EIF3EP60228 445 aaKnown RBP15.72■□□□□ 0.11
CPSF7-205ENST00000439958 PKDCCQ504Y2 493 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 DCLRE1AQ6PJP8 1040 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 LRRTM3Q86VH5 581 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 FAM71DQ8N9W8 422 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 SMARCD1Q96GM5 515 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 DDIT4Q9NX09 232 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 CDH9Q9ULB4 789 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 ENPP3O14638 875 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 MCF2LO15068 1137 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 PECAM1P16284 738 aaPredicted RBP15.72■□□□□ 0.11
CPSF7-205ENST00000439958 ITGA8P53708 1063 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 EFHC1Q5JVL4 640 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 DUPD1Q68J44 220 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 TTC19Q6DKK2 380 aaPredicted RBP15.72■□□□□ 0.11
CPSF7-205ENST00000439958 SH2D3CQ8N5H7 860 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 RABEP2Q9H5N1 569 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 TTC3P53804 2025 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 RBP3P10745 1247 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 HSD17B3P37058 310 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 HDAC4P56524 1084 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 BASP1P80723 227 aaKnown RBP15.72■□□□□ 0.11
CPSF7-205ENST00000439958 DEUP1Q05D60 604 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 DDR2Q16832 855 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 CTXN3Q4LDR2 81 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 CCDC185Q8N715 623 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 ATAD1Q8NBU5 361 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 FNIP1Q8TF40 1166 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 SIK2Q9H0K1 926 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 LRRC19Q9H756 370 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 PCYOX1Q9UHG3 505 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 AP4E1Q9UPM8 1137 aa15.72■□□□□ 0.11
CPSF7-205ENST00000439958 NKX3-2P78367 333 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 MRPS5P82675 430 aaKnown RBP15.71■□□□□ 0.11
CPSF7-205ENST00000439958 IZUMO3Q5VZ72 239 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 HSFY1Q96LI6 401 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 SEPT5Q99719 369 aaPredicted RBP15.71■□□□□ 0.11
CPSF7-205ENST00000439958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.71■□□□□ 0.118e-9■■■■■ 27.8
CPSF7-205ENST00000439958 SLC27A5Q9Y2P5 690 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 RANBP2P49792 3224 aaKnown RBP15.71■□□□□ 0.11
CPSF7-205ENST00000439958 GABRDO14764 452 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 MOCS2O96007 188 aaPredicted RBP15.71■□□□□ 0.11
CPSF7-205ENST00000439958 ALDH2P05091 517 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 ACTN2P35609 894 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 LRRC38Q5VT99 294 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 KIAA1841Q6NSI8 718 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 FTHL17Q9BXU8 183 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 NR2E3Q9Y5X4 410 aa15.71■□□□□ 0.11
CPSF7-205ENST00000439958 CCNG2Q16589 344 aa15.71■□□□□ 0.1
CPSF7-205ENST00000439958 KRT71Q3SY84 523 aa15.71■□□□□ 0.1
CPSF7-205ENST00000439958 INTS6LQ5JSJ4 861 aaKnown RBP15.71■□□□□ 0.1
CPSF7-205ENST00000439958 ZNF598Q86UK7 904 aaKnown RBP15.71■□□□□ 0.1
CPSF7-205ENST00000439958 NIPA2Q8N8Q9 360 aa15.71■□□□□ 0.1
CPSF7-205ENST00000439958 PAWRQ96IZ0 340 aaKnown RBP15.71■□□□□ 0.1
CPSF7-205ENST00000439958 TSPAN18Q96SJ8 248 aa15.71■□□□□ 0.1
CPSF7-205ENST00000439958 SEPT10Q9P0V9 454 aa15.71■□□□□ 0.1
CPSF7-205ENST00000439958 STAP1Q9ULZ2 295 aa15.71■□□□□ 0.1
CPSF7-205ENST00000439958 MAGED2Q9UNF1 606 aaPredicted RBP15.71■□□□□ 0.1
CPSF7-205ENST00000439958 TRAPPC3O43617 180 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 LIASO43766 372 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 EOMESO95936 686 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 FAM26DQ5JW98 314 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 FAXCQ5TGI0 409 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 TRAF7Q6Q0C0 670 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 SLC26A9Q7LBE3 791 aa15.7■□□□□ 0.1
CPSF7-205ENST00000439958 ADAM33Q9BZ11 813 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms