RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 PDGFRBP09619 1106 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 C6orf222P0C671 652 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 GARTP22102 1010 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 FGFR3P22607 806 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 PEX2P28328 305 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 NOMO3P69849 1222 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 OTUD4Q01804 1114 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 LAMTOR4Q0VGL1 99 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 MMRN1Q13201 1228 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 MYBPC2Q14324 1141 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 SIX1Q15475 284 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 NPNTQ6UXI9 565 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 DCLK2Q8N568 766 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 DDX1Q92499 740 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 STRA6Q9BX79 667 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 WHRNQ9P202 907 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 DOLKQ9UPQ8 538 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 MYPNQ86TC9 1320 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 SEC24DO94855 1032 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 C4BPAP04003 597 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 ALADP13716 330 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 FUT4P22083 530 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 KCNA4P22459 653 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 CDH6P55285 790 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 GCNT1Q02742 428 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 VGLL4Q14135 290 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 FNBP1LQ5T0N5 605 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 NXNQ6DKJ4 435 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 TREML1Q86YW5 311 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 DCPSQ96C86 337 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 TRIM11Q96F44 468 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 SEPT10Q9P0V9 454 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 PSMC3IPQ9P2W1 217 aaPredicted RBP10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 IP6K2Q9UHH9 426 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 SCINQ9Y6U3 715 aa10.34□□□□□ -0.75
CDC42SE1-202ENST00000439374 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 CAPN8A6NHC0 703 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 H0YCG3 227 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 ATP6V1G1O75348 118 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 PGGT1BP53609 377 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZNF200P98182 395 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 DSG1Q02413 1049 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 KBTBD12Q3ZCT8 623 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 MFSD5Q6N075 450 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 ST13P4Q8IZP2 240 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 SAMD3Q8N6K7 520 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 USP13Q92995 863 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 FAM149B1Q96BN6 582 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 ADPGKQ9BRR6 497 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 BTBD7Q9P203 1132 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 NENFQ9UMX5 172 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 PLA2G4CQ9UP65 541 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 HES2Q9Y543 173 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 LRRC42Q9Y546 428 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 MAST2Q6P0Q8 1798 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 SPECC1L-ADORA2AF8WAN1 911 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 AIM2O14862 343 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 FSCN2O14926 492 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 ADCY3O60266 1144 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 LDHAP00338 332 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 CCNB1P14635 433 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 TPP2P29144 1249 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 AQP4P55087 323 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 PDK4Q16654 411 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 HADHQ16836 314 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 C15orf59Q2T9L4 293 aaPredicted RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 SH3PXD2AQ5TCZ1 1133 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 ATF7IP2Q5U623 682 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 IRGCQ6NXR0 463 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 ENOSF1Q7L5Y1 443 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 NIPA1Q7RTP0 329 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 SCUBE1Q8IWY4 988 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 C12orf29Q8N999 325 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 EIF1ADQ8N9N8 165 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 OPTNQ96CV9 577 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 MARK4Q96L34 752 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 DCUN1D5Q9BTE7 237 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 KLHL4Q9C0H6 718 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 PORCNQ9H237 461 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 XPO7Q9UIA9 1087 aaKnown RBP10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 TTLL3Q9Y4R7 772 aa10.33□□□□□ -0.76
CDC42SE1-202ENST00000439374 A0A087WZ62 844 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 AGRPO00253 132 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 TP73O15350 636 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 PROCP04070 461 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 APRTP07741 180 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 FAM200BP0CF97 657 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 ZNF286BP0CG31 522 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 FDX1P10109 184 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 CYP2C8P10632 490 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 UNGP13051 313 aaPredicted RBP10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 PHKA2P46019 1235 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 DLG1Q12959 904 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 MED21Q13503 144 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 NFIL3Q16649 462 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 NUDCD3Q8IVD9 361 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
CDC42SE1-202ENST00000439374 KCTD17Q8N5Z5 321 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms