RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SYCE1Q8N0S2 351 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 STKLD1Q8NE28 680 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 PDZD8Q8NEN9 1154 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 JOSD2Q8TAC2 188 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 PSMG2Q969U7 264 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 TRMT2BQ96GJ1 504 aaKnown RBP21.7■■□□□ 1.06
CHD3-204ENST00000439235 SLITRK1Q96PX8 696 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 NSUN3Q9H649 340 aaKnown RBP21.7■■□□□ 1.06
CHD3-204ENST00000439235 POPDC2Q9HBU9 364 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 LMCD1Q9NZU5 365 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 IP6K2Q9UHH9 426 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 MAGED2Q9UNF1 606 aaPredicted RBP21.7■■□□□ 1.06
CHD3-204ENST00000439235 HCFC2Q9Y5Z7 792 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 CAPN6Q9Y6Q1 641 aa21.7■■□□□ 1.06
CHD3-204ENST00000439235 MYH10P35580 1976 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 YJEFN3A6XGL0 299 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 E7ENQ6 273 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 PER2O15055 1255 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 GRAP2O75791 330 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 ZMYND10O75800 440 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 EPCAMP16422 314 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 GPD1P21695 349 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 RFC1P35251 1148 aaPredicted RBP21.69■■□□□ 1.06
CHD3-204ENST00000439235 PSEN1P49768 467 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 RPL7AP62424 266 aaKnown RBP21.69■■□□□ 1.06
CHD3-204ENST00000439235 MTMR3Q13615 1198 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 TAF5Q15542 800 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 BEND5Q7L4P6 421 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 BHLHA9Q7RTU4 235 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 MON1AQ86VX9 555 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 EMC1Q8N766 993 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 OVCA2Q8WZ82 227 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 NDRG1Q92597 394 aaKnown RBP21.69■■□□□ 1.06
CHD3-204ENST00000439235 UXTQ9UBK9 157 aaPredicted RBP21.69■■□□□ 1.06
CHD3-204ENST00000439235 PLXNA3P51805 1871 aa21.69■■□□□ 1.06
CHD3-204ENST00000439235 GRID2IPA4D2P6 1211 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 C2CD4BA6NLJ0 364 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 SPDYE4A6NLX3 237 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 DPYSL4O14531 572 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 CAPN9O14815 690 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 BUB1BO60566 1050 aaPredicted RBP21.68■■□□□ 1.06
CHD3-204ENST00000439235 PALMO75781 387 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 HNRNPA1P09651 372 aaKnown RBP eCLIP21.68■■□□□ 1.06
CHD3-204ENST00000439235 PSMA2P25787 234 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 SDC4P31431 198 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 YWHAGP61981 247 aaKnown RBP eCLIP21.68■■□□□ 1.06
CHD3-204ENST00000439235 TAF10Q12962 218 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 PIGHQ14442 188 aaPredicted RBP21.68■■□□□ 1.06
CHD3-204ENST00000439235 MESDQ14696 234 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 ZNF569Q5MCW4 686 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 DAAM2Q86T65 1068 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 KHSRPQ92945 711 aaKnown RBP eCLIP21.68■■□□□ 1.06
CHD3-204ENST00000439235 MYRFLQ96LU7 910 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 ZNF512Q96ME7 567 aaPredicted RBP21.68■■□□□ 1.06
CHD3-204ENST00000439235 SLC2A13Q96QE2 648 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 TLR8Q9NR97 1041 aaKnown RBP21.68■■□□□ 1.06
CHD3-204ENST00000439235 ZDHHC7Q9NXF8 308 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.68■■□□□ 1.06
CHD3-204ENST00000439235 GMIPQ9P107 970 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 STAP1Q9ULZ2 295 aa21.68■■□□□ 1.06
CHD3-204ENST00000439235 TMEM110-MUSTN1A8MSY1 372 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 KIF2AO00139 706 aaPredicted RBP21.67■■□□□ 1.06
CHD3-204ENST00000439235 ZNF500O60304 480 aaPredicted RBP21.67■■□□□ 1.06
CHD3-204ENST00000439235 TUBB4AP04350 444 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 PDGFRAP16234 1089 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 HMGA1P17096 107 aaKnown RBP21.67■■□□□ 1.06
CHD3-204ENST00000439235 MAN1A1P33908 653 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 FLT3P36888 993 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 MATKP42679 507 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 ZNF143P52747 638 aaPredicted RBP21.67■■□□□ 1.06
CHD3-204ENST00000439235 GNG11P61952 73 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 ZNF697Q5TEC3 545 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 BSPRYQ5W0U4 402 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 BTBD8Q5XKL5 378 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 NYAP1Q6ZVC0 841 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 HFE2Q6ZVN8 426 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 DNAJB7Q7Z6W7 309 aaPredicted RBP21.67■■□□□ 1.06
CHD3-204ENST00000439235 DEFB106AQ8N104 65 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.67■■□□□ 1.06
CHD3-204ENST00000439235 RXFP2Q8WXD0 754 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 BTBD6Q96KE9 485 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 C16orf45Q96MC5 204 aaPredicted RBP21.67■■□□□ 1.06
CHD3-204ENST00000439235 CNPY3Q9BT09 278 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 IRX2Q9BZI1 471 aaPredicted RBP21.67■■□□□ 1.06
CHD3-204ENST00000439235 TRIM7Q9C029 511 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 PRDM12Q9H4Q4 367 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 ABCC13Q9NSE7 274 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 DZANK1Q9NVP4 752 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 RRN3Q9NYV6 651 aa21.67■■□□□ 1.06
CHD3-204ENST00000439235 XYLBO75191 536 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 PROSCO94903 275 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 POU2F2P09086 479 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 SRGAP2BP0DMP2 458 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 NOS2P35228 1153 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 SLC1A1P43005 524 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 PTPN9P43378 593 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 PPP3CCP48454 512 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 ACAP1Q15027 740 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 NIPA2Q8N8Q9 360 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 LRRC57Q8N9N7 239 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms