RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ST3GAL5Q9UNP4 418 aa14.51□□□□□ -0.09
PTCHD3-201ENST00000438700 CDH16O75309 829 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 KRT16P08779 473 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 NDST1P52848 882 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 INCA1Q0VD86 236 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 POLNQ7Z5Q5 900 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 CCHCR1Q8TD31 782 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 MRRFQ96E11 262 aaKnown RBP14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 ADAM33Q9BZ11 813 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 ECT2Q9H8V3 914 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 BARX2Q9UMQ3 279 aaPredicted RBP14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 C15orf41Q9Y2V0 281 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 SNX9Q9Y5X1 595 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 EXOC1LA0A1B0GW35 172 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 SNX3O60493 162 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 NQO1P15559 274 aaKnown RBP14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 GAD2Q05329 585 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 ITIH4Q14624 930 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 FAM102AQ5T9C2 384 aaPredicted RBP14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 SH3PXD2AQ5TCZ1 1133 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 C9orf57Q5W0N0 161 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 SESTD1Q86VW0 696 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 ZBED8Q8IZ13 594 aa14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 PCSK9Q8NBP7 692 aaKnown RBP14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 RSRC1Q96IZ7 334 aaKnown RBP14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.5□□□□□ -0.09
PTCHD3-201ENST00000438700 TCP11X1B4DZS4 312 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 POC1B-GALNT4F8VUJ3 575 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 GRAP2O75791 330 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 ITGAVP06756 1048 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 KRT7P08729 469 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 PTPN7P35236 360 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 THPOP40225 353 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 VEGFBP49765 207 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 HADHQ16836 314 aaKnown RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 RAB6CQ53S08 254 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 LRRC52Q8N7C0 313 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 C12orf29Q8N999 325 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 KCTD6Q8NC69 237 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 SLC35B2Q8TB61 432 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 NKD2Q969F2 451 aaPredicted RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 PIWIL1Q96J94 861 aaKnown RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 CCDC77Q9BR77 488 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 CALN1Q9BXU9 219 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 RAB6CQ9H0N0 254 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 VPS37BQ9H9H4 285 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 RASA4BC9J798 803 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 RASA4O43374 803 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 KCNE1P15382 129 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 KDELR1P24390 212 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 MIPP30301 263 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 NRLP54845 237 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 MGAT3Q09327 533 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 ZNF268Q14587 947 aaPredicted RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 STAT4Q14765 748 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 ZKSCAN8Q15776 578 aaPredicted RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 XKR4Q5GH76 650 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 RNASEH2BQ5TBB1 312 aaKnown RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 BZW1Q7L1Q6 419 aaKnown RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 RNF180Q86T96 592 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 RELL1Q8IUW5 271 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 MRPL45Q9BRJ2 306 aaKnown RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 CCDC134Q9H6E4 229 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 GOLGA2P5Q9HBQ8 144 aa14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 DRG1Q9Y295 367 aaKnown RBP14.49□□□□□ -0.09
PTCHD3-201ENST00000438700 CLGNO14967 610 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 TCEA3O75764 348 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 GSTA1P08263 222 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 GPD2P43304 727 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 HTRA3P83110 453 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 SOX4Q06945 474 aaPredicted RBP14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 PDIA2Q13087 525 aaKnown RBP14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 MORF4L2Q15014 288 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 CDO1Q16878 200 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 RFX6Q8HWS3 928 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 ANKMY2Q8IV38 441 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 FNIP1Q8TF40 1166 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 SPDL1Q96EA4 605 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 CFAP57Q96MR6 1250 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 PCDH9Q9HC56 1237 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 TRMT13Q9NUP7 481 aaKnown RBP14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 CEP350Q5VT06 3117 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 MEIS3P2A8K0S8 358 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 PIAS1O75925 651 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 CD4P01730 458 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 CYP3A5P20815 502 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 PEX19P40855 299 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 CTCFP49711 727 aaPredicted RBP14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 ACLYP53396 1101 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 ITGA7Q13683 1181 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 NUGGCQ68CJ6 796 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 ZFP42Q96MM3 310 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 NT5C1AQ9BXI3 368 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 AGO3Q9H9G7 860 aaKnown RBP14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 LGALS13Q9UHV8 139 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 USP18Q9UMW8 372 aa14.48□□□□□ -0.09
PTCHD3-201ENST00000438700 E5RJQ4 531 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 PIRO00625 290 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 RNF8O76064 485 aa14.47□□□□□ -0.09
PTCHD3-201ENST00000438700 VDRP11473 427 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms