RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 O00370 1275 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 SETSIPP0DME0 302 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 GJA4P35212 333 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 ATP5C1P36542 298 aaKnown RBP26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 GOLGA8FQ08AF8 430 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 GOLGA8DPQ0D2H9 430 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 GRSF1Q12849 480 aaKnown RBP eCLIP26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 MAN2A1Q16706 1144 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 EXOC3L4Q17RC7 722 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 RAB41Q5JT25 222 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 ARHGAP18Q8N392 663 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 SYNPOQ8N3V7 929 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 RBBP8NLQ8NC74 664 aaPredicted RBP26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 CDK5RAP1Q96SZ6 601 aaKnown RBP26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 LINC00597Q9H2U6 94 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 NAGPAQ9UK23 515 aa26.04■■□□□ 1.76
RAPGEF1-206ENST00000438647 MYO16Q9Y6X6 1858 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 A0A1W2PQH9 124 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 TRDMT1O14717 391 aaKnown RBP26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 RALAP11233 206 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 PRKCSHP14314 528 aaPredicted RBP26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 NBL1P41271 181 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 PDE4CQ08493 712 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 MTAPQ13126 283 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 CCINQ13939 588 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 PPP2R5DQ14738 602 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 KLHDC10Q6PID8 442 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 TRIM65Q6PJ69 517 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 LCLAT1Q6UWP7 414 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 MAMSTRQ6ZN01 415 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 OTUB2Q96DC9 234 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 ZFRQ96KR1 1074 aaKnown RBP26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 KREMEN1Q96MU8 473 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 CRACR2AQ9BSW2 395 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 LRRC4Q9HBW1 653 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 UBE2TQ9NPD8 197 aaPredicted RBP26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 CLIC5Q9NZA1 410 aa26.03■■□□□ 1.76
RAPGEF1-206ENST00000438647 CACNA1IQ9P0X4 2223 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 RARGP13631 454 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 PGFP49763 221 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 MFAP3P55082 362 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 CNGA2Q16280 664 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 ZNF528Q3MIS6 628 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 TMEM196Q5HYL7 178 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 ZC3H14Q6PJT7 736 aaKnown RBP26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 ZNF276Q8N554 614 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 NMUR1Q9HB89 426 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 PIEZO1Q92508 2521 aa26.02■■□□□ 1.76
RAPGEF1-206ENST00000438647 SP9P0CG40 484 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 KRT5P13647 590 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 PLA2G4AP47712 749 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 CCR3P51677 355 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 TKTL1P51854 596 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 ZNF132P52740 706 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 SASS6Q6UVJ0 657 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 MAML2Q8IZL2 1156 aaPredicted RBP26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 P2RY13Q9BPV8 354 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 TUBGCP2Q9BSJ2 902 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 OSER1Q9NX31 292 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 APEX2Q9UBZ4 518 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 DNMT3LQ9UJW3 386 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 CNTN6Q9UQ52 1028 aa26.01■■□□□ 1.75
RAPGEF1-206ENST00000438647 PROB1E7EW31 1015 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 RNF225M0QZC1 329 aaPredicted RBP26■■□□□ 1.75
RAPGEF1-206ENST00000438647 TBX18O95935 607 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 ZBED1O96006 694 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 DRD1P21728 446 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 HOXD11P31277 338 aaPredicted RBP26■■□□□ 1.75
RAPGEF1-206ENST00000438647 C10orf120Q5SQS8 335 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 CCDC183Q5T5S1 534 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 SMYD5Q6GMV2 418 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 ADGRG2Q8IZP9 1017 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 SPEM1Q8N4L4 309 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 UBA3Q8TBC4 463 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 ENOX1Q8TC92 643 aaKnown RBP26■■□□□ 1.75
RAPGEF1-206ENST00000438647 TFAP2BQ92481 460 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 CHFRQ96EP1 664 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 PHOX2BQ99453 314 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 NDST4Q9H3R1 872 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 PRMT8Q9NR22 394 aaPredicted RBP26■■□□□ 1.75
RAPGEF1-206ENST00000438647 RBM12Q9NTZ6 932 aaKnown RBP26■■□□□ 1.75
RAPGEF1-206ENST00000438647 MYO15AQ9UKN7 3530 aa26■■□□□ 1.75
RAPGEF1-206ENST00000438647 ADH1CP00326 375 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 SLC9A1P19634 815 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 MRE11P49959 708 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 CSTF1Q05048 431 aaKnown RBP25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 VWA3BQ502W6 1294 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 PKDCCQ504Y2 493 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 SCD5Q86SK9 330 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 SIX6OS1Q8N1H7 587 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 KCTD13Q8WZ19 329 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 CD101Q93033 1021 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 KLF16Q9BXK1 252 aaPredicted RBP25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 ANO10Q9NW15 660 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 LSM7Q9UK45 103 aaKnown RBP25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 NFE2L3Q9Y4A8 694 aa25.99■■□□□ 1.75
RAPGEF1-206ENST00000438647 KCNJ18B7U540 433 aa25.98■■□□□ 1.75
RAPGEF1-206ENST00000438647 M0QYV0 167 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms