RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LAMA4Q16363 1823 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ZMYM2Q9UBW7 1377 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ZC3H4Q9UPT8 1303 aaKnown RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 A8MUI8 341 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 TRDMT1O14717 391 aaKnown RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 PRPF4O43172 522 aaKnown RBP eCLIP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 CHEK2O96017 543 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 APOEP02649 317 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 MCF2P10911 925 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 TSHRP16473 764 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ATICP31939 592 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 GMPSP49915 693 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 FLOT2Q14254 428 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 DENND1BQ6P3S1 775 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 CPNE8Q86YQ8 564 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 DAW1Q8N136 415 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 FAM13CQ8NE31 585 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 APPL2Q8NEU8 664 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 OR6P1Q8NGX9 317 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 JADE3Q92613 823 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 MRPL1Q9BYD6 325 aaKnown RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 CCDC134Q9H6E4 229 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 PLEKHA5Q9HAU0 1116 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.92□□□□□ -1.31e-8■□□□□ 9.6
CSDE1-205ENST00000438362 ZNF212Q9UDV6 495 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 SUN2Q9UH99 717 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 SLC39A10Q9ULF5 831 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 POLIQ9UNA4 740 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 SLC12A4Q9UP95 1085 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 MYH7P12883 1935 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 WNT10BO00744 389 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 RPS12P25398 132 aaKnown RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 NUDT2P50583 147 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ATXN3P54252 364 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 CXCL9Q07325 125 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ACVR2BQ13705 512 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 LRRC8EQ6NSJ5 796 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 SLC25A41Q8N5S1 370 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 LRRC39Q96DD0 335 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 HIC2Q96JB3 615 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 CCDC138Q96M89 665 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 ZNF184Q99676 751 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 MMADHCQ9H3L0 296 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-205ENST00000438362 TMEM134Q9H6X4 195 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 AP4E1Q9UPM8 1137 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 COQ4Q9Y3A0 265 aa6.92□□□□□ -1.3
CSDE1-205ENST00000438362 N4BP2Q86UW6 1770 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 FAM237BA0A1B0GVD1 139 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 ARHGEF37A1IGU5 675 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 MTSS1O43312 755 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 DGKIO75912 1065 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 APOA4P06727 396 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SETSIPP0DME0 302 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 THRAP10827 490 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CPA3P15088 417 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 ATP6V1C1P21283 382 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CYP2F1P24903 491 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 RBL1P28749 1068 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 OAZ1P54368 228 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SLC1A5Q15758 541 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 N4BP2L1Q5TBK1 243 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 DPY19L2Q6NUT2 758 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 VSTM1Q6UX27 236 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 METTL7BQ6UX53 244 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 GALNT4Q8N4A0 578 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 ZSWIM2Q8NEG5 633 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 DNERQ8NFT8 737 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SPOCK2Q92563 424 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 PTPRN2Q92932 1015 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 PPP2R3CQ969Q6 453 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 MAGEB5Q9BZ81 275 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 NSMCE4AQ9NXX6 385 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 NDUFA13Q9P0J0 144 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CPSF3Q9UKF6 684 aaKnown RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 TSPAN16Q9UKR8 245 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CDYLQ9Y232 598 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 LRP6O75581 1613 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 MROH7Q68CQ1 1323 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 ACKR2O00590 384 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 GNGT2O14610 69 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 PSMD3O43242 534 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 MICAL2O94851 1124 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SLC25A27O95847 323 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CCNE2O96020 404 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 CD4P01730 458 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SLC4A1P02730 911 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SERPINE1P05121 402 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 ATP5BP06576 529 aaKnown RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 GNL1P36915 607 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 PRAMEP78395 509 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 PHEXP78562 749 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 MGAT5Q09328 741 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 NBPF12Q5TAG4 269 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-205ENST00000438362 MON1BQ7L1V2 547 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 STKLD1Q8NE28 680 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SEC14L1Q92503 715 aa6.91□□□□□ -1.3
CSDE1-205ENST00000438362 SLCO2A1Q92959 643 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms