RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 IL1R1P14778 569 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 CAPN3P20807 821 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 PTPN7P35236 360 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 CARSP49589 748 aaKnown RBP6.98□□□□□ -1.29
SPEN-202ENST00000438066 CTXN1P60606 82 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 UBE2HP62256 183 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 DYNLL1P63167 89 aaKnown RBP6.98□□□□□ -1.29
SPEN-202ENST00000438066 NOMO3P69849 1222 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 PTK2BQ14289 1009 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 ARHGAP15Q53QZ3 475 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 TMEM200BQ69YZ2 307 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 MFSD6Q6ZSS7 791 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 TBC1D1Q86TI0 1168 aaPredicted RBP6.98□□□□□ -1.29
SPEN-202ENST00000438066 TMTC1Q8IUR5 882 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 MPP5Q8N3R9 675 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 LILRA3Q8N6C8 439 aaPredicted RBP6.98□□□□□ -1.29
SPEN-202ENST00000438066 GLIS1Q8NBF1 620 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 C1orf131Q8NDD1 294 aaKnown RBP6.98□□□□□ -1.29
SPEN-202ENST00000438066 SLC30A5Q8TAD4 765 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 FAM71BQ8TC56 605 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 RUBCNQ92622 972 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 RASSF1Q9NS23 344 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 TM7SF3Q9NS93 570 aa6.98□□□□□ -1.29
SPEN-202ENST00000438066 SCAF8Q9UPN6 1271 aaKnown RBP6.98□□□□□ -1.29
SPEN-202ENST00000438066 MYH1P12882 1939 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 SLX4Q8IY92 1834 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 TMEM233B4DJY2 109 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 PYCARD-AS1I3L0S3 204 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 SMIM22K7EJ46 135 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 DAPK3O43293 454 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 ALDH1A2O94788 518 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 PCP11498 1178 aaKnown RBP6.97□□□□□ -1.29
SPEN-202ENST00000438066 XRCC6P12956 609 aaKnown RBP eCLIP6.97□□□□□ -1.292e-6■■□□□ 12.3
SPEN-202ENST00000438066 MC3RP41968 323 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 MRE11P49959 708 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 RTP5Q14D33 572 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 SLC44A4Q53GD3 710 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 CCDC93Q567U6 631 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 FAM173BQ6P4H8 233 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 MOGAT3Q86VF5 341 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 FAM184AQ8NB25 1140 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 FLCNQ8NFG4 579 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 CYP2W1Q8TAV3 490 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 ZNF518BQ9C0D4 1074 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 RNF41Q9H4P4 317 aaPredicted RBP6.97□□□□□ -1.29
SPEN-202ENST00000438066 ZSCAN16Q9H4T2 348 aaPredicted RBP6.97□□□□□ -1.29
SPEN-202ENST00000438066 ALG13Q9NP73 1137 aaKnown RBP6.97□□□□□ -1.29
SPEN-202ENST00000438066 ING3Q9NXR8 418 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 ZNF212Q9UDV6 495 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 POLLQ9UGP5 575 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 NAP1L2Q9ULW6 460 aaPredicted RBP6.97□□□□□ -1.29
SPEN-202ENST00000438066 ADAMTSL1Q8N6G6 1762 aa6.97□□□□□ -1.29
SPEN-202ENST00000438066 ROBO3Q96MS0 1386 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 CLCA1A8K7I4 914 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 H3BQV1 296 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 MMP10P09238 476 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 SBK3P0C264 359 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 RCAN1P53805 252 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 RAB32Q13637 225 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 PDE1CQ14123 709 aaPredicted RBP6.96□□□□□ -1.29
SPEN-202ENST00000438066 HABP2Q14520 560 aaPredicted RBP6.96□□□□□ -1.29
SPEN-202ENST00000438066 MZT2BQ6NZ67 158 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 CTR9Q6PD62 1173 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 LRRTM4Q86VH4 590 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 DZIP1Q86YF9 867 aaKnown RBP6.96□□□□□ -1.29
SPEN-202ENST00000438066 SP8Q8IXZ3 490 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 COLGALT2Q8IYK4 626 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 ABHD4Q8TB40 342 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 TBC1D16Q8TBP0 767 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 STT3BQ8TCJ2 826 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 GDF15Q99988 308 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 EIF2AQ9BY44 585 aaKnown RBP6.96□□□□□ -1.29
SPEN-202ENST00000438066 CRNKL1Q9BZJ0 848 aaKnown RBP6.96□□□□□ -1.29
SPEN-202ENST00000438066 SCAND2PQ9GZW5 306 aaPredicted RBP6.96□□□□□ -1.29
SPEN-202ENST00000438066 CHST8Q9H2A9 424 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 UNC45AQ9H3U1 944 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 GRPEL1Q9HAV7 217 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 CD209Q9NNX6 404 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 ATP8A2Q9NTI2 1148 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 SIDT1Q9NXL6 827 aaKnown RBP6.96□□□□□ -1.29
SPEN-202ENST00000438066 AATFQ9NY61 560 aaKnown RBP eCLIP6.96□□□□□ -1.29
SPEN-202ENST00000438066 JAG2Q9Y219 1238 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.96□□□□□ -1.29
SPEN-202ENST00000438066 ATP6V0A2Q9Y487 856 aa6.96□□□□□ -1.29
SPEN-202ENST00000438066 SCN9AQ15858 1988 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 MROH7-TTC4A0A0A0MT08 1334 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 FAM205AQ6ZU69 1335 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 STK36Q9NRP7 1315 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 PSME4Q14997 1843 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 CYP2D7A0A087X1C5 515 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 A6NCN8 305 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 IFIT3O14879 490 aaKnown RBP6.96□□□□□ -1.3
SPEN-202ENST00000438066 AREL1O15033 823 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 ZBTB43O43298 467 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 ORC4O43929 436 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 ATP1A3P13637 1013 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 CRHR1P34998 444 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 KRT9P35527 623 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 METAP2P50579 478 aaKnown RBP eCLIP6.96□□□□□ -1.3
SPEN-202ENST00000438066 KCNQ1P51787 676 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms