RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 NSL1Q96IY1 281 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 CELF4Q9BZC1 486 aaKnown RBP16.37■□□□□ 0.21
PTPN13-204ENST00000436978 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 IMPDH2P12268 514 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 MFSD10Q14728 455 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 ERVK-10P10266 1014 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 AKR1A1P14550 325 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 PRLRP16471 622 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 PRIM2P49643 509 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 CREMQ03060 361 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 PTPAQ15257 358 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 PCBP1Q15365 356 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPN13-204ENST00000436978 RAD9BQ6WBX8 426 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 LSP1P33241 339 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 MRPL28Q13084 256 aaKnown RBP16.37■□□□□ 0.21
PTPN13-204ENST00000436978 C11orf96Q7Z7L8 435 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 THTPAQ9BU02 230 aa16.37■□□□□ 0.21
PTPN13-204ENST00000436978 DDHD2O94830 711 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 CAMKK2Q96RR4 588 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 CCDC85BQ15834 202 aaPredicted RBP16.36■□□□□ 0.21
PTPN13-204ENST00000436978 FAM118BQ9BPY3 351 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 UBXN8O00124 270 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 GLP2RO95838 553 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 MFSD4BQ5TF39 518 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 DIS3LQ8TF46 1054 aaKnown RBP16.36■□□□□ 0.21
PTPN13-204ENST00000436978 ABHD16BQ9H3Z7 469 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 RUVBL2Q9Y230 463 aaKnown RBP16.36■□□□□ 0.21
PTPN13-204ENST00000436978 KNDC1Q76NI1 1749 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 CYTH3O43739 400 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 NFIAQ12857 509 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 MIB1Q86YT6 1006 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 MAGEB18Q96M61 343 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 RBP1P09455 135 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 WLSQ5T9L3 541 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 SLC47A2Q86VL8 602 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 DTX3LQ8TDB6 740 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 SH3GL1Q99961 368 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 NFKBIZQ9BYH8 718 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 PCDHB5Q9Y5E4 795 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 AKAP12Q02952 1782 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 BMP10O95393 424 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 PPATQ06203 517 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 PTGISQ16647 500 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 DEPDC1Q5TB30 811 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 KCNQ5Q9NR82 932 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 DEAF1O75398 565 aaPredicted RBP16.36■□□□□ 0.21
PTPN13-204ENST00000436978 ALDH5A1P51649 535 aaPredicted RBP16.36■□□□□ 0.21
PTPN13-204ENST00000436978 PTPN11Q06124 597 aaPredicted RBP16.36■□□□□ 0.21
PTPN13-204ENST00000436978 SLC29A2Q14542 456 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 ZNF557Q8N988 423 aaPredicted RBP16.36■□□□□ 0.21
PTPN13-204ENST00000436978 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
PTPN13-204ENST00000436978 CBWD1Q9BRT8 395 aa16.36■□□□□ 0.21
PTPN13-204ENST00000436978 SLCO1B7G3V0H7 640 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
PTPN13-204ENST00000436978 TM9SF1O15321 606 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 CCNG1P51959 295 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 KYNUQ16719 465 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 CPA4Q9UI42 421 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 VANGL2Q9ULK5 521 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 MAP3K13O43283 966 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 XYLBO75191 536 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 SEC24DO94855 1032 aaPredicted RBP16.35■□□□□ 0.21
PTPN13-204ENST00000436978 ZNF135P52742 658 aaPredicted RBP16.35■□□□□ 0.21
PTPN13-204ENST00000436978 RHOAP61586 193 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 CNTNAP2Q9UHC6 1331 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 MPOP05164 745 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 SLC27A1Q6PCB7 646 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 TLK2Q86UE8 772 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 PHLPP1O60346 1717 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 TRIM49D1C9J1S8 452 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 IFRD1O00458 451 aaPredicted RBP16.35■□□□□ 0.21
PTPN13-204ENST00000436978 NFIBO00712 420 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 TRPC1P48995 793 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 NBPF12Q5TAG4 269 aaPredicted RBP16.35■□□□□ 0.21
PTPN13-204ENST00000436978 REPS2Q8NFH8 660 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 MRPL48Q96GC5 212 aaKnown RBP16.35■□□□□ 0.21
PTPN13-204ENST00000436978 PRDM16Q9HAZ2 1276 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 VCPIP1Q96JH7 1222 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 ADORA2AP29274 412 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 OVOS1Q6IE37 1185 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 DENND1BQ6P3S1 775 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 ENGASEQ8NFI3 743 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 SLC5A5Q92911 643 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 C1QTNF7Q9BXJ2 289 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 ELOVL4Q9GZR5 314 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 DDX43Q9NXZ2 648 aaKnown RBP16.35■□□□□ 0.21
PTPN13-204ENST00000436978 TKTL1P51854 596 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 ARMC2Q8NEN0 867 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 ERP27Q96DN0 273 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 ZCCHC2Q9C0B9 1178 aaKnown RBP16.35■□□□□ 0.21
PTPN13-204ENST00000436978 ATP11BQ9Y2G3 1177 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 UMODL1Q5DID0 1318 aa16.35■□□□□ 0.21
PTPN13-204ENST00000436978 TCRBV5S4A2TA0A5A2 114 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 CASTOR2A6NHX0 329 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 PHACTR4Q8IZ21 702 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 SLC12A8A0AV02 714 aa16.34■□□□□ 0.21
PTPN13-204ENST00000436978 E2F8A0AVK6 867 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms