RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 YWHAHQ04917 246 aaPredicted RBP22.06■■□□□ 1.12
PTPRF-207ENST00000436724 NNTQ13423 1086 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 EFHC1Q5JVL4 640 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 ZDHHC24Q6UX98 284 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 ATL2Q8NHH9 583 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 FBXO25Q8TCJ0 367 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 SMARCD1Q96GM5 515 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 CASD1Q96PB1 797 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 ULBP1Q9BZM6 244 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 HOMER3Q9NSC5 361 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 TTC3P53804 2025 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 GOLGA6BA6NDN3 693 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 LIASO43766 372 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 OR4Q2P0C623 313 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 PTPN9P43378 593 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 TAZQ16635 292 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 CA9Q16790 459 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 TBCBQ99426 244 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 DDX23Q9BUQ8 820 aaKnown RBP22.06■■□□□ 1.12
PTPRF-207ENST00000436724 MAGEB5Q9BZ81 275 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 CRISPLD2Q9H0B8 497 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 ELAC1Q9H777 363 aaKnown RBP22.06■■□□□ 1.12
PTPRF-207ENST00000436724 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.06■■□□□ 1.127e-6■□□□□ 8.6
PTPRF-207ENST00000436724 PCDH10Q9P2E7 1040 aa22.06■■□□□ 1.12
PTPRF-207ENST00000436724 DCDC2CA8MYV0 355 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 HHLA1C9JL84 531 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 VPS41P49754 854 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 DRG2P55039 364 aaKnown RBP22.05■■□□□ 1.12
PTPRF-207ENST00000436724 DCAF6Q58WW2 860 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.05■■□□□ 1.122e-9■■■■■ 84.3
PTPRF-207ENST00000436724 SNRNP25Q9BV90 132 aaKnown RBP22.05■■□□□ 1.12
PTPRF-207ENST00000436724 NRDE2Q9H7Z3 1164 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 LRFN2Q9ULH4 789 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 PCDHB8Q9UN66 801 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 HSF2BPO75031 334 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 MATKP42679 507 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 YWHAZP63104 245 aaKnown RBP22.05■■□□□ 1.12
PTPRF-207ENST00000436724 BYSLQ13895 437 aaKnown RBP22.05■■□□□ 1.12
PTPRF-207ENST00000436724 SYPL2Q5VXT5 272 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 ARCQ7LC44 396 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 RFX6Q8HWS3 928 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 THEM5Q8N1Q8 247 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 SPATA18Q8TC71 538 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 CENPIQ92674 756 aaPredicted RBP22.05■■□□□ 1.12
PTPRF-207ENST00000436724 ASIC3Q9UHC3 531 aa22.05■■□□□ 1.12
PTPRF-207ENST00000436724 TANC1Q9C0D5 1861 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 YJEFN3A6XGL0 299 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 E7ENQ6 273 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 USP17L7P0C7H9 530 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 COL6A1P12109 1028 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 TYMPP19971 482 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 PBX3P40426 434 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 ARSEP51690 589 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 DPYSL3Q14195 570 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 LEKR1Q6ZMV7 388 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 CRIPAKQ8N1N5 446 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 GLIS1Q8NBF1 620 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 ZNF333Q96JL9 665 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 FMO2Q99518 471 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 TADA2AO75478 443 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 ENDOD1O94919 500 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 GAS8O95995 478 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 BBS12Q6ZW61 710 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 ACTL9Q8TC94 416 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 GRK7Q8WTQ7 553 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 APBB2Q92870 758 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 B3GALT6Q96L58 329 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 C10orf88Q9H8K7 445 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 CSNK1G1Q9HCP0 422 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 ATP11BQ9Y2G3 1177 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 NEU2Q9Y3R4 380 aa22.04■■□□□ 1.12
PTPRF-207ENST00000436724 SYNJ2BP-COX16A0A087WUM0 186 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 TMEM189-UBE2V1I3L0A0 370 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 PAX3P23760 479 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 DAOAP59103 153 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 OTUD4Q01804 1114 aaKnown RBP22.03■■□□□ 1.12
PTPRF-207ENST00000436724 BOLA3Q53S33 107 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 RAB41Q5JT25 222 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 OTUD1Q5VV17 481 aaPredicted RBP22.03■■□□□ 1.12
PTPRF-207ENST00000436724 LRRC31Q6UY01 552 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 GSTA5Q7RTV2 222 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 COX16Q9P0S2 106 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 NAALADL1Q9UQQ1 740 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 ZNF148Q9UQR1 794 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 EFR3BQ9Y2G0 817 aa22.03■■□□□ 1.12
PTPRF-207ENST00000436724 NT5C1B-RDH14C9J2C7 533 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 TP73O15350 636 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 FYNP06241 537 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 PECAM1P16284 738 aaPredicted RBP22.02■■□□□ 1.12
PTPRF-207ENST00000436724 DESP17661 470 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 IL4RP24394 825 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 SULT1E1P49888 294 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 TSPY1Q01534 308 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 PTK6Q13882 451 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 KRT81Q14533 505 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 FAM131BQ86XD5 332 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 MREGQ8N565 214 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 CCDC185Q8N715 623 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 GOLGA6L1Q8N7Z2 621 aa22.02■■□□□ 1.12
PTPRF-207ENST00000436724 SH3GL2Q99962 352 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms