RNA–Protein interactions for RNA: ENST00000435630.5

CNOT10-205, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 1 (best)

Gene CNOT10, Length 2,290 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-205ENST00000435630 VHLP40337 213 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 ARFIP2P53365 341 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 DYNLT1P63172 113 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 SP4Q02446 784 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 TNFAIP2Q03169 654 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 LBRQ14739 615 aaKnown RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 KHDC1Q4VXA5 237 aaKnown RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 SCARA3Q6AZY7 606 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 BRSK2Q8IWQ3 736 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 PALM2Q8IXS6 379 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 PDIK1LQ8N165 341 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 WDTC1Q8N5D0 677 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 RSAD2Q8WXG1 361 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 CDHR1Q96JP9 859 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 CYTH2Q99418 400 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 C12orf65Q9H3J6 166 aaKnown RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 MMADHCQ9H3L0 296 aaPredicted RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 DHX33Q9H6R0 707 aaKnown RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 NMRK1Q9NWW6 199 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 SAE1Q9UBE0 346 aaPredicted RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 STRIP2Q9ULQ0 834 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 TNRC18O15417 2968 aaPredicted RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 RANBP2P49792 3224 aaKnown RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 IQANK1A0A1B0GTG1 560 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 DPPA5A6NC42 116 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 NVLO15381 856 aaKnown RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 GSC2O15499 205 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 LPXNO60711 386 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 DUSP11O75319 330 aaKnown RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 LRCH4O75427 683 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 STAM2O75886 525 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 PIAS1O75925 651 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 ATP4AP20648 1035 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 PSMA2P25787 234 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 ARL2P36404 184 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 SLC18A2Q05940 514 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 KLC1Q07866 573 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 KRT72Q14CN4 511 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 PRKD1Q15139 912 aaPredicted RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 MUM1Q2TAK8 710 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 BBS9Q3SYG4 887 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 GJC2Q5T442 439 aaPredicted RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 CYP4A22Q5TCH4 519 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 FAM91A1Q658Y4 838 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 IQSEC1Q6DN90 963 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 DSTYKQ6XUX3 929 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 WDR49Q8IV35 697 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 FNIP1Q8TF40 1166 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 NSL1Q96IY1 281 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 TMEM120AQ9BXJ8 343 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 NIF3L1Q9GZT8 377 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 KCNK13Q9HB14 408 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 XPNPEP3Q9NQH7 507 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 CISHQ9NSE2 258 aa13.2□□□□□ -0.3
CNOT10-205ENST00000435630 GNEQ9Y223 722 aaKnown RBP13.2□□□□□ -0.3
CNOT10-205ENST00000435630 TCRBV7S3A2A0A539 114 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 CFAP69A5D8W1 941 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 SIGLEC16A6NMB1 481 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 DLDP09622 509 aaKnown RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 SERPINB3P29508 390 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 RGS19P49795 217 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 PTK7Q13308 1070 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 SMTNL2Q2TAL5 461 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 SMYD5Q6GMV2 418 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 SH2D5Q6ZV89 423 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 UBE2Q1Q7Z7E8 422 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 LRRC6Q86X45 466 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 DIS3LQ8TF46 1054 aaKnown RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 SLC44A1Q8WWI5 657 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 FAM136AQ96C01 138 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 KLF6Q99612 283 aaPredicted RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 TMEM134Q9H6X4 195 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 C10orf88Q9H8K7 445 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 XPO7Q9UIA9 1087 aaKnown RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 POLIQ9UNA4 740 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 RBM47A0AV96 593 aaKnown RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 CLGNO14967 610 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 ARIH2O95376 493 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 CST3P01034 146 aaPredicted RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 MT-ND3P03897 115 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 KDELR1P24390 212 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 IL1R2P27930 398 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 RFC1P35251 1148 aaPredicted RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 SATB1Q01826 763 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 OCRLQ01968 901 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 RCN1Q15293 331 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 ACSBG2Q5FVE4 666 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 APBB1IPQ7Z5R6 666 aaPredicted RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 ARFGAP1Q8N6T3 406 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 TFAP2BQ92481 460 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 PAWRQ96IZ0 340 aaKnown RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 FBXO6Q9NRD1 293 aaPredicted RBP13.19□□□□□ -0.3
CNOT10-205ENST00000435630 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
CNOT10-205ENST00000435630 LRCH1Q9Y2L9 728 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms