RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 COG1Q8WTW3 980 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 TBCBQ99426 244 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 MMP3P08254 477 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 TGM2P21980 687 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 MCL1Q07820 350 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 FOXD4Q12950 439 aaPredicted RBP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 MFSD4BQ5TF39 518 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 LLGL2Q6P1M3 1020 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 FAM131BQ86XD5 332 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 LGI2Q8N0V4 545 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 SEMA6BQ9H3T3 888 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 TRABDQ9H4I3 376 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 ACTR5Q9H9F9 607 aaPredicted RBP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 SYNDIG1LA6NDD5 238 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 FXR1P51114 621 aaKnown RBP eCLIP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 FAM83EQ2M2I3 478 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 OXCT2Q9BYC2 517 aaPredicted RBP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 FBXL5Q9UKA1 691 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 CHMP2BQ9UQN3 213 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 TRAF3IP3Q9Y228 551 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 PSMD10O75832 226 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 POLR2LP62875 67 aaKnown RBP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 DENND5BQ6ZUT9 1274 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 VPS37AQ8NEZ2 397 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 DACT3Q96B18 629 aaPredicted RBP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 ZSWIM1Q9BR11 485 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 ECT2Q9H8V3 914 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 CHCHD3Q9NX63 227 aaKnown RBP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 ANGPT2O15123 496 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 HAUS5O94927 633 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 ARIH2O95376 493 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 OR1E1P30953 314 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 GCNT1Q02742 428 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 HECTD3Q5T447 861 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 PPP4R4Q6NUP7 873 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 ILDR1Q86SU0 546 aaPredicted RBP16.16■□□□□ 0.18
NEDD4-202ENST00000435532 GRAMD1AQ96CP6 724 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 NT5MQ9NPB1 228 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 RAD18Q9NS91 495 aa16.16■□□□□ 0.18
NEDD4-202ENST00000435532 SNRPAP09012 282 aaKnown RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 MSH3P20585 1137 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 PTPN3P26045 913 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 MARC1Q5VT66 337 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 PRDM16Q9HAZ2 1276 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 TBC1D3BA6NDS4 549 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 CXCL14O95715 111 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 FNTAP49354 379 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 POU4F1Q01851 419 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 SMARCB1Q12824 385 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 CENPPQ6IPU0 288 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 PATL1Q86TB9 770 aaKnown RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 TGS1Q96RS0 853 aaKnown RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 NLNQ9BYT8 704 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 NDEL1Q9GZM8 345 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 WWP1Q9H0M0 922 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 DNMT3LQ9UJW3 386 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 RPTORQ8N122 1335 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 MEFVO15553 781 aaPredicted RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 PSMD5Q16401 504 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 SLC2A14Q8TDB8 520 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 EDEM1Q92611 657 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 ELAC2Q9BQ52 826 aaKnown RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 CORO1BQ9BR76 489 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 SPTLC1O15269 473 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 ENDOD1O94919 500 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 LMNAP02545 664 aaKnown RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 BDNFP23560 247 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 CARSP49589 748 aaKnown RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 CTCFP49711 727 aaPredicted RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 ANXA11P50995 505 aaKnown RBP16.15■□□□□ 0.18
NEDD4-202ENST00000435532 CLCN6P51797 869 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 SNCBQ16143 134 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 PRUNE1Q86TP1 453 aa16.15■□□□□ 0.18
NEDD4-202ENST00000435532 AKAP3O75969 853 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 GLUD1P00367 558 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 SERPINF2P08697 491 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 OCM2P0CE71 109 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 OCMP0CE72 109 aaPredicted RBP16.14■□□□□ 0.17
NEDD4-202ENST00000435532 ATP6V1E1P36543 226 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 PTK7Q13308 1070 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 HSP90AA5PQ58FG0 334 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 FAM47EQ6ZV65 393 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 ESYT3A0FGR9 886 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 YDJCA8MPS7 323 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 PTPN1P18031 435 aaKnown RBP16.14■□□□□ 0.17
NEDD4-202ENST00000435532 PBLDP30039 288 aaPredicted RBP16.14■□□□□ 0.17
NEDD4-202ENST00000435532 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 AGAP9Q5VTM2 703 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 KRT80Q6KB66 452 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 TPCN2Q8NHX9 752 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.14■□□□□ 0.17
NEDD4-202ENST00000435532 FBXO10Q9UK96 956 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 OR6C75A6NL08 312 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 SPAG7O75391 227 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 GLRA2P23416 452 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 TUBP50607 506 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 HIRAP54198 1017 aaPredicted RBP16.14■□□□□ 0.17
NEDD4-202ENST00000435532 ESRRGP62508 458 aa16.14■□□□□ 0.17
NEDD4-202ENST00000435532 PDCD2Q16342 344 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms