RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SPATA31A1Q5TZJ5 1347 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 KIF1AQ12756 1690 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 FAM86B1E9PN63 330 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 DDX39AO00148 427 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 TLR3O15455 904 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A9O60656 530 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CFHP08603 1231 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 FAM86B2P0C5J1 330 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 PSMC3P17980 439 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 C21orf59P57076 290 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 RPL10AP62906 217 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 MROH9Q5TGP6 573 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 EGFLAMQ63HQ2 1017 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CENPSQ8N2Z9 138 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 PHTF2Q8N3S3 785 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 KCNN1Q92952 543 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 WDR83Q9BRX9 315 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A7Q9HAW7 530 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A10Q9HAW8 530 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 UGT1A8Q9HAW9 530 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 KBTBD13C9JR72 458 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 SMARCA1P28370 1054 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 MFAP3P55082 362 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 WDR75Q8IWA0 830 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 MCOLN2Q8IZK6 566 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 NDUFAF2Q8N183 169 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 FOXP3Q9BZS1 431 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 SUN2Q9UH99 717 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 XPO7Q9UIA9 1087 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ROBO3Q96MS0 1386 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 GIPC1O14908 333 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 SERPINA6P08185 405 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CDH3P22223 829 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 KCNA4P22459 653 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 BCAP31P51572 246 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 STAT2P52630 851 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 SNX16P57768 344 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ERFEQ4G0M1 354 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 METTL21CQ5VZV1 264 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 SLFN12Q8IYM2 578 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 FAM156AQ8NDB6 213 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 MZB1Q8WU39 189 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 P2RX7Q99572 595 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 HNRNPABQ99729 332 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 NUF2Q9BZD4 464 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 SACM1LQ9NTJ5 587 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 FADS3Q9Y5Q0 445 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 TCRBV9S1A1TA0A576 114 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 KLHL41O60662 606 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 TMEM63AO94886 807 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 PROSCO94903 275 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ETFBP38117 255 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 PFKPQ01813 784 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CYP2A13Q16696 494 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 SMTNL2Q2TAL5 461 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 FBXO33Q7Z6M2 555 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CHSY1Q86X52 802 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 TAS1R2Q8TE23 839 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 NLRP7Q8WX94 980 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 DHRS1Q96LJ7 313 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 DRC3Q9H069 523 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 XAB2Q9HCS7 855 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 PSMD13Q9UNM6 376 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 NOD1Q9Y239 953 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 TMED5Q9Y3A6 229 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CCNT2O60583 730 aaKnown RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ITGAXP20702 1163 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 HOXD11P31277 338 aaPredicted RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 NDST2P52849 883 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 TSPY1Q01534 308 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ITGADQ13349 1161 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ABCB5Q2M3G0 1257 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 FAXCQ5TGI0 409 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CIAPIN1Q6FI81 312 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CBWD2Q8IUF1 395 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 AHI1Q8N157 1196 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 MYO1HQ8N1T3 1032 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ALLCQ8N6M5 410 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 HELQQ8TDG4 1101 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 RNF34Q969K3 372 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 EME1Q96AY2 570 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 VPS50Q96JG6 964 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 ACSS2Q9NR19 701 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 SLC38A7Q9NVC3 462 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 PNPOQ9NVS9 261 aa7.73□□□□□ -1.17
CPSF6-202ENST00000435070 GPC6Q9Y625 555 aaPredicted RBP7.73□□□□□ -1.17
CPSF6-202ENST00000435070 NUP188Q5SRE5 1749 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 DHRS4L1P0CG22 281 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 RPL7AP62424 266 aaKnown RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 SPIRE1Q08AE8 756 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 FLOT2Q14254 428 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 OGFRL1Q5TC84 451 aaPredicted RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 CCDC33Q8N5R6 958 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 RSAD2Q8WXG1 361 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 JADE3Q92613 823 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 NAP1L4Q99733 375 aaKnown RBP7.72□□□□□ -1.17
CPSF6-202ENST00000435070 PKP2Q99959 881 aa7.72□□□□□ -1.17
CPSF6-202ENST00000435070 NEURL2Q9BR09 285 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms