RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 MYL6P60660 151 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 GFPT1Q06210 699 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 GOLGA8FQ08AF8 430 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 GOLGA8DPQ0D2H9 430 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 MESP2Q0VG99 397 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 SDE2Q6IQ49 451 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 SLC36A4Q6YBV0 504 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 FAM35AQ86V20 835 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 IQUBQ8NA54 791 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 SMARCD1Q96GM5 515 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 SCNM1Q9BWG6 230 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 B3GNT5Q9BYG0 378 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 CHORDC1Q9UHD1 332 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP1-204ENST00000434728 CEP192Q8TEP8 1941 aa14.21□□□□□ -0.14
CDC42EP1-204ENST00000434728 CACNA1EQ15878 2313 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 PLXND1Q9Y4D7 1925 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 GOLGA6L22H0YM25 854 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 SPTLC2O15270 562 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 EXOC3O60645 756 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 AP1G2O75843 785 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 P4HA1P13674 534 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 HNRNPLP14866 589 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 ITPKAP23677 461 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 KIR2DL1P43626 348 aaPredicted RBP14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 SLC5A3P53794 718 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 SNRPFP62306 86 aaKnown RBP14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 SIM1P81133 766 aaPredicted RBP14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 SKOR2Q2VWA4 1001 aaPredicted RBP14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 ZNF667Q5HYK9 610 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 SPDYCQ5MJ68 293 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 RABEPKQ7Z6M1 372 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 DEFB119Q8N690 84 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 FRMD1Q8N878 549 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 CEP76Q8TAP6 659 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 ZNF507Q8TCN5 953 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 ZNF396Q96N95 335 aaPredicted RBP14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 KCNK16Q96T55 309 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 SMYD3Q9H7B4 428 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 CCSER2Q9H7U1 834 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 SPHK2Q9NRA0 654 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 KRT82Q9NSB4 513 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 KBTBD4Q9NVX7 518 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 ATRXP46100 2492 aa14.2□□□□□ -0.14
CDC42EP1-204ENST00000434728 TULP3O75386 442 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 HOXD12P35452 270 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 HOXD13P35453 343 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 WASP42768 502 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 DUOXA1Q1HG43 343 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 GRAMD4Q6IC98 578 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 SLC23A3Q6PIS1 610 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 BBS7Q8IWZ6 715 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 CHPFQ8IZ52 775 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 TERB1Q8NA31 727 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 SCAMP5Q8TAC9 235 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 SCFD1Q8WVM8 642 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 ZCCHC14Q8WYQ9 949 aaKnown RBP14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 XPO6Q96QU8 1125 aaKnown RBP14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 MAGEF1Q9HAY2 307 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 TMEM74BQ9NUR3 256 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 TMEM30AQ9NV96 361 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 DNAJC17Q9NVM6 304 aaKnown RBP14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 GMIPQ9P107 970 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 CGNQ9P2M7 1197 aaKnown RBP14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 MBD1Q9UIS9 605 aaPredicted RBP14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 LSM7Q9UK45 103 aaKnown RBP14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 MORC2Q9Y6X9 1032 aaPredicted RBP14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 TNRC6BQ9UPQ9 1833 aaKnown RBP14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 ZFYVE26Q68DK2 2539 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 ADAMTS9Q9P2N4 1935 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 ZZEF1O43149 2961 aa14.19□□□□□ -0.14
CDC42EP1-204ENST00000434728 AKAP13Q12802 2813 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 NEDD8-MDP1E9PL57 170 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 HOXC11O43248 304 aaPredicted RBP14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 TGFB1I1O43294 461 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 STX6O43752 255 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 OPHN1O60890 802 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 ADAM23O75077 832 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 NDUFS2O75306 463 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 STAU1O95793 577 aaKnown RBP14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 TOP3BO95985 862 aaKnown RBP14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 NTSR1P30989 418 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 NASPP49321 788 aaPredicted RBP14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 TUBP50607 506 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 CDH8P55286 799 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 MAP7D1Q3KQU3 841 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 UNC13DQ70J99 1090 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 EPM2AIP1Q7L775 607 aaPredicted RBP14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 ACOT1Q86TX2 421 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 RGL4Q8IZJ4 473 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 LINC00301Q8NCQ3 95 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 GOLGA5Q8TBA6 731 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 ERLEC1Q96DZ1 483 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 BBS2Q9BXC9 721 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 FBXO44Q9H4M3 255 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 SLC39A2Q9NP94 309 aa14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 TLR8Q9NR97 1041 aaKnown RBP14.18□□□□□ -0.14
CDC42EP1-204ENST00000434728 CALCOCO1Q9P1Z2 691 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms