RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 CACHD1Q5VU97 1274 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 PPP1R32Q7Z5V6 425 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 TMEFF1Q8IYR6 380 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 TMEM57Q8N5G2 664 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 CEP70Q8NHQ1 597 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 ADAMTS18Q8TE60 1221 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 GOLGA1Q92805 767 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 GRAMD1AQ96CP6 724 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 NEIL1Q96FI4 390 aaPredicted RBP8.13□□□□□ -1.11
PTPRK-212ENST00000434424 YTHDC1Q96MU7 727 aaKnown RBP8.13□□□□□ -1.11
PTPRK-212ENST00000434424 GPR63Q9BZJ6 419 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 TMEM168Q9H0V1 697 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 BARX1Q9HBU1 254 aaPredicted RBP8.13□□□□□ -1.11
PTPRK-212ENST00000434424 NOD2Q9HC29 1040 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 IL23AQ9NPF7 189 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 TTLL3Q9Y4R7 772 aa8.13□□□□□ -1.11
PTPRK-212ENST00000434424 MYOM3Q5VTT5 1437 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 AHDC1Q5TGY3 1603 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-212ENST00000434424 TBKBP1A7MCY6 615 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 E9PLN8 166 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 RRP9O43818 475 aaKnown RBP8.12□□□□□ -1.11
PTPRK-212ENST00000434424 ZBED4O75132 1171 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 PIAS2O75928 621 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 ANXA6P08133 673 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 RPS6KB1P23443 525 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 RRM1P23921 792 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 SLC5A2P31639 672 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 CASP6P55212 293 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 DCAF7P61962 342 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 KRT17Q04695 432 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 HGFACQ04756 655 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 VMACQ2NL98 169 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 ZNF750Q32MQ0 723 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 MGAT5BQ3V5L5 792 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 ICE2Q659A1 982 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 ANKS6Q68DC2 871 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 RINT1Q6NUQ1 792 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 BBS12Q6ZW61 710 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 FEZF2Q8TBJ5 459 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 ST8SIA4Q92187 359 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 RABGGTAQ92696 567 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 ZUFSPQ96AP4 578 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 C3orf49Q96BT1 292 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 C7orf26Q96N11 449 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 KLHL32Q96NJ5 620 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 TWNKQ96RR1 684 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 TREX2Q9BQ50 279 aaPredicted RBP8.12□□□□□ -1.11
PTPRK-212ENST00000434424 VKORC1Q9BQB6 163 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 NUDT16L1Q9BRJ7 211 aaKnown RBP8.12□□□□□ -1.11
PTPRK-212ENST00000434424 KRTAP17-1Q9BYP8 105 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 PAIP1Q9H074 479 aaKnown RBP8.12□□□□□ -1.11
PTPRK-212ENST00000434424 BRD8Q9H0E9 1235 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 ELAC1Q9H777 363 aaKnown RBP8.12□□□□□ -1.11
PTPRK-212ENST00000434424 HPSEQ9Y251 543 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 NWD1Q149M9 1564 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 DCCP43146 1447 aa8.12□□□□□ -1.11
PTPRK-212ENST00000434424 TET3O43151 1660 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 EIF2AK4Q9P2K8 1649 aaKnown RBP8.11□□□□□ -1.11
PTPRK-212ENST00000434424 A0A1W2PPH5 198 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 FSD2A1L4K1 749 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 TMCC2O75069 709 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 VPS4BO75351 444 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 VIPP01282 170 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 CYP1A1P04798 512 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-212ENST00000434424 AKT1P31749 480 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 KRT32Q14532 448 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 TBR1Q16650 682 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 BMT2Q1RMZ1 405 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 ATXN7L2Q5T6C5 722 aaPredicted RBP8.11□□□□□ -1.11
PTPRK-212ENST00000434424 NFRKBQ6P4R8 1299 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 KCTD20Q7Z5Y7 419 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 PDPRQ8NCN5 879 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 SLC46A1Q96NT5 459 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 TTYH3Q9C0H2 523 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 SLC25A32Q9H2D1 315 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 CHODLQ9H9P2 273 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 DNMT3BQ9UBC3 853 aaKnown RBP8.11□□□□□ -1.11
PTPRK-212ENST00000434424 PI4KBQ9UBF8 816 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 DAPP1Q9UN19 280 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 SHOC2Q9UQ13 582 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 RRP7AQ9Y3A4 280 aaKnown RBP8.11□□□□□ -1.11
PTPRK-212ENST00000434424 CDY1Q9Y6F8 540 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 RIMS2Q9UQ26 1411 aa8.11□□□□□ -1.11
PTPRK-212ENST00000434424 HOXA3O43365 443 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-212ENST00000434424 ORC4O43929 436 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 KRT38O76015 456 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 RTN3O95197 1032 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-212ENST00000434424 RASAL1O95294 804 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
PTPRK-212ENST00000434424 KLRK1P26718 216 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 ATXN1P54253 815 aaKnown RBP8.1□□□□□ -1.11
PTPRK-212ENST00000434424 ATP1A4Q13733 1029 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 ANKRD1Q15327 319 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 RPS6KA2Q15349 733 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 CCDC96Q2M329 555 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 ACAD10Q6JQN1 1059 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 ANKS1BQ7Z6G8 1248 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 ADGRE4PQ86SQ3 457 aa8.1□□□□□ -1.11
PTPRK-212ENST00000434424 TDRD7Q8NHU6 1098 aaKnown RBP8.1□□□□□ -1.11
PTPRK-212ENST00000434424 ZFP28Q8NHY6 868 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms